Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06367 ATGTGTGACAATTTTAATTTTGAGGGTTCCACTTTCCTTGAAAATATTAAATATGTATGGAATCTGGAGGAAAAAGGCAAAGATTATCTACAAAAACAACTTCCTGACATCAATAAAATAGCACTTGTTGTGCTTGATGAAGTGAGTGAATCAGACCAAATGAAATCATTATGTGCAAGTTGTGAATGGTTTGGTCCTTGGAGTGTAATATTGATTACAACTACAGAAAAGCATTTACTTGATCCCCTTGACTTGGGCATTAAATATGAAATACATGAAATGGATGCAAGTAGATCACTTGAGCTTTTCAGTTGGCATGCATTCAAGCATTCTAGTCCTACAAAAAAATTGTTAAAACTCTCGAGAAAAGCAGTTTCTTATTGTGGAGGAATACCATTGGCTCTTGAAGTGTTGGGTTCGTTGTTACTTGACAGAGCATCAGAGTTAGCTTGCTTCTATATCGAAAAGGATAGACACAACATTACACAATTATTAAGTGGCTATAAACTTGATGCAGAAACTGGGATAACTAAACTCATTGAACGGAGGCTGCTTAAGGTTGACAAGAATAACAAGCTTGAAATGCATGATTTGTTGCGGGGAGAGAATATCTCATCCTCATTATTGCAAGCAATTCAAGGTTCTAGAATTTCTATCATCATTTTCTCAATAAACTATGCTAATTCTAGATGGTGCCTTCAAGAGCTGGAGAAAATCATGGAGTGTCATAGAACTATTGGTCAAGATGTTGTACATGTATTCTATGGTGTGGAACCATCAGAAGTGCGTAGTCAAAATGGATCTTTTGGCAAAGCATTTGAAGGGCTTGCACGCAGAAACTCTGCGACGAAAGATATTGTTATTACTTGGTGTTAG 876 0.3642 MCDNFNFEGSTFLENIKYVWNLEEKGKDYLQKQLPDINKIALVVLDEVSESDQMKSLCASCEWFGPWSVILITTTEKHLLDPLDLGIKYEIHEMDASRSLELFSWHAFKHSSPTKKLLKLSRKAVSYCGGIPLALEVLGSLLLDRASELACFYIEKDRHNITQLLSGYKLDAETGITKLIERRLLKVDKNNKLEMHDLLRGENISSSLLQAIQGSRISIIIFSINYANSRWCLQELEKIMECHRTIGQDVVHVFYGVEPSEVRSQNGSFGKAFEGLARRNSATKDIVITWC. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06367 291 ProSiteProfiles TIR domain profile. 145 291 IPR000157 GO:0007165
Seca9g06367 291 Gene3D - 166 290 IPR035897 -
Seca9g06367 291 Pfam TIR domain 171 290 IPR000157 GO:0007165
Seca9g06367 291 SMART till_3 158 289 IPR000157 GO:0007165
Seca9g06367 291 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 200 278 IPR044974 GO:0006952
Seca9g06367 291 Gene3D - 94 165 IPR042197 -
Seca9g06367 291 SUPERFAMILY Toll/Interleukin receptor TIR domain 178 276 IPR035897 -
Seca9g06367 291 Pfam NB-ARC domain 38 145 IPR002182 GO:0043531
Seca9g06367 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 149 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06367 Seca-Chr9 180856357 180857559 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06367 38 200 WRKY Transcription Factor Family AT5G45050 26.733 6.94e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06367 - - lja:Lj0g3v0353669.1 310.457