Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g06353 | ATGTCTTCCCCAAGTGCATCCTCATCCAACACCAAAGTTTTCTTGAGCTTCACAATGGGAGACGTTGAAGTGGAGCCTTTCATTTTGATTCTCAGTAAAGACTTAAGATGTTCCGGAGTCCAAACTTTCTTCAACAACCTAGACGATGTTGGAAGAGAAAAACAAAAATTGTTGCGCTCGGACCTGCGAGCAATAGAACGGTCTAAGGTTTCTATCGTTGTTTTTTCTGAGCACTACGCTGGTTTTAACTTGTGTCTGCGGGAGCTAGAAAAGATTATGGAGTGTCACAGAGCCACGGGTCAGATGGTTTTGCCAGTGTTCTTTGGCGTGGACAGATGGGATGTGCGTAAGCAAAGTGGTAGGTTTGGAGAAAAGTTTGAACGAATGATCAAAGTGACGTCGACGGAGGAAGACACTGTGTTGAGATGGAGGAGAGCCCTCACCGAAGTTGCTTTCTTTCCCGGTTGCTTCGCATCACCTCGCAGTTATGGTGCTATAGATGGAATTATGAATACTGTTCATATGGTGCTAGATGGTAAATTTTTTTCTCGCCCACTCCATCCAGTTGGGATAGATGTTCATGTGAAAGGTGTTTGTGACAGATTTAAATATAATTTGAAAAAAGTTCACTTGGTAGGAATATGGGGAAAGGGAGGAATTGGTAAAACATCAGTTGCCAACTTTGTTTATGACAGCATGTGTCACAAATTTGAGGGTTCAAGTTTCCTTGCAAATATTAAGGATGTATGGAAGCAGGATAATGGCAAAGATTATCTACAAAAGCAACTTTCCGATATCAATAATACGACATCAATAATAAATAGCACTGAAACAGAGAAAATGTTTTCTCATAAACGAGCACTTGTAGTACTTGATGATGTGAGTGATTCAGATCAACTGATATCATTATGTCGAAGTTGTGAATGGTTTGGTGATGGGAGTGTAATATTGATTACAACTAGAGAGAAGTATTTACTTGATCTCCTTGAACTTCAATATAAATATGAAATGAAGGAAATGGGCACAAGTATATCACTTGAACTTTTTAGTTGGCATGCATTCAAGAATTCTAGTCCTACAAAAGATCTGTTAAAACTCTCAAGAAGAGCAATTTCTTACTGTGGGGGGCTGCCACTAGCTCTTGAAGTTTTGGGCTCGTTGTTACTTGACAGAACAACATCAGAGTGGAAAAGTGTATTGAAGCTACTTAAAAGAAATCAAAGTAATGAGGTGATAGATATACTAAAAATGAGCTATGATTTTCTAGATGATGATGAGAAAAAAATATTCATTGAAATAGCTTGTTTCTACATCGGAAAGGATAGACATAGAATTACACAACTATTAAATGGTTGTGGACTTGCTGCAGAAACAGGGATAAGTAAACTCATTGAACGGAGCCTTCTTAAGGTTGACCAGAATAACAAGCTTGAAATGCATGACTTGTTGCAAGAGATGGGAAGAGAAATGAATCATTTAAACCCAAAATCCAAGTGGATCTACGATGTGTTCTTGAGTTTCAGAGGTGGTGACACTCGCCAGTCTTTTACTGCTCATCTCCATGCCGCTTTAAAAGATGCTGGTATTGAGGTTTACATGGATGAAAAACTTGAAAAAGGAGAAAATATCACATCCTCATTGTTGCAAGCAATTGAAGGTTCTAGAATTTCTATCATCATTTTCTCAATAAACTATGCTAATTCTAGATGGTGCCTTCAAGAGGTAGAGAAAATCATGGAGTGTCATAGAACTACTGGTCAAGAAGTTATGCCTGTATTCTATGGTGTGGAACCATCTGAAGTGCGTAACCAAATCGAATCTTTTGGAGAAGCATTTGAAGGACTTGTACGCAGAATCTCAGCTACAAAAAATATGATTATCAGTTGGAAAAGAGCACTTAGTGAGGCTGCAAACTTGTCTGGATGGACTTTAAATAATTACAGAACTGAAAATGAGTTGATTGATGACATTCGTAGAACTGTTACCAGAAAACTAGACGATGGTTCATACTTAGTTGTTGCTAATCACCCAGTGGGAGTGGAATCTCGTGTGCAGGATATAATTCAATTGTTAAGTGGTAAATCGAATGAGGTTTGCATGGTTGGAATCTTGGGAATGGGAAGATGTGGTAAAACTACCATTGCTAAAGCCGTTTATAATGAAATTAATCAAAACTTTGAAGGTAAAAGTTTCCTTGCAGACATAAGGGAGGTTTGGGACCAAGATGGTGGCAAAGTTCATTTGCAAGAACAACTTCTTTCAGGCATCTTGAAAACTAGAAGAATGAAAATTAATAACATTGAATTGGGAAGAACTATAATAAAGGAAAGCCTTTGCCAAGAAAGGGCACTTGTTGTATTTGATGATATAAATAATGTGGACCAACTAAAGGCTTTGTGTGGAAGTCGTGATTGGTTTGGTCAGGGAAGTAGGTTAATCATCACAACTAGAGATGAGCATTTACTGAAAGTTCTCAAAGTGGAAAATATATACAGAATGAAAGAAATGGATGAAAATGAATCTCTTGAGCTTTTTTGTTGGCATGCATTTAAGCAAGCTGCACCATCAGCAGATTTTGTTGAACTCTCTAGAAGGGTTGTTGCTTACTCTGGAAGACTGCCACTAGCCCTTGAAGTTCTTGGCTCCTATTTGTTTGAAAGGGAAATTACTGAATGGAAAAGTGCATTGTCGAAACTTGAAGTTATTCCCAATGATCAAATACAGAAGAAATTGAGAATAAGCTATGATGGTTGTGATGATATGGAGAAAGATATATTCCTTGATATATGTTGTTTCTTTATAGGTAAGGAGAGAAACTATGTCACACAGATTTTAGATGGTTGTGTACGTGGTGCAGAAATTGGGATAACTGTCCTCATAGAGCGAAGCCTTGTAAAAGTTGGCAAGAATAACAAGCTTGAAATGCATGAATTGCTAAAAGTCATGGGAAGGGAGATAATTCGTGAGACAAAACCAGAGAATCCTGAGGAGCGTAGCAGATTATGGTTTCATGATGATGTGCTTGATGTGATGATAAAGAACATTGCAACAATAGCTGTCAAGGGACTGGCTTTTAGTTTACCAAAAACAAATGATGTTGTTTTTGAGACTAAAGCATTTATGATGATGAAGAGACTCAGATTACTTCAACTTGATAATGTAAAACTTACCGGAGATTTTGAGTATGTATCAGAAGACTTGCGCTGGCTCTGTTGGCATGGATATCCTTTAAGATACATTCCTGGGAACTTTTATCTGGAAAAATTAGTTGCTATGGACTTAAAGCACAGCAAACTACAATTAGTCTGGAAGGAGCCGCAGCTGCTTGATAGGCTGAAAGTCCTCAATCTGAGTCATTCCCATTACTTGACACGAACCCCGGACTTTTCAGGACTACCAAATCTTGAAAAGCTAATCCTCAAAGATTGTCCGAAATTGTCAGAGGTTCACTCAACAATTGGAGATCTCAAATATCTTATTCTGGTAAATTTAAAGGACTGTAAATCCCTCAGTCACCTCCCAAGAAGTCTCTATAAGTTGAAGTCTCTGAAATCTCTTGTTCTTTCCGGCTGTTCAAAAATTGACAAGTTGGAAGAAGACATCATGCAAATGGAATCCTTGACAAGTCTAAGAACAGATAACACTGCTATTACACAAGTGCCCTCTTCTCTAGTAAGATTAAAAAATATCAAATATGTCTCTTTGTGCAACCATGAAGGATTATCACGTGATGTATTTCCTTCACTAATTTGGTCTTTTATGTCACCAAGAAATCTTATGTGTAAAGTTTTGGGGAGCTTTTCATCTTTACTTCCTAGTCTTTCACTTGGTTTATCTGCCAATAATCATGTAGAATTGGAATCAAGCACATCTCATATGACATATGCAGAGACTTCCACATTAATTGATCTTCAGAACTCCATTCACATTGCAGGGTCTGGAAATTCCTCCAGATCTCTTGTTATTCAAGCTGGAGAGTGCAACAAAGCCACTGATACTTTTACAAAGAATATTTTACAGGAATGGACTAGTGATGGATCTAGTGACTCTGAGTGCTCTTTTCCTGGTGACACACGTTCTAAATGGCTAACCTTCAATGGCGATTCCTCATTAGTGTTTAAAGTGCCTAATAATGGTAGCAAGTTGAAAGGAATGACTCTGCGCATTATTTATTCATCTTCCCTTGTCAACCTGGCTCCTGAGTGTGTTCTTCTTAATGTGTTCAATTACACAAAGAACACCACTCTGTCCTACAAGCTAGACACAACAACTTCTCTTAAAGATGAAGAGTGGCAAGGATTGATGTCAAATCTTGAACCTGGTGATGAAGTGGAGATTGTTATAGTTTTGGGACATCGATTTACTGTGAAGAAGATAGTGGCCCATCTAATATATAAAGAAATAACCAATCACAAAATTATGGAGTGTTCATCAGCGCTAGACAAGGGTCAAATTTGA | 4458 | 0.3798 | MSSPSASSSNTKVFLSFTMGDVEVEPFILILSKDLRCSGVQTFFNNLDDVGREKQKLLRSDLRAIERSKVSIVVFSEHYAGFNLCLRELEKIMECHRATGQMVLPVFFGVDRWDVRKQSGRFGEKFERMIKVTSTEEDTVLRWRRALTEVAFFPGCFASPRSYGAIDGIMNTVHMVLDGKFFSRPLHPVGIDVHVKGVCDRFKYNLKKVHLVGIWGKGGIGKTSVANFVYDSMCHKFEGSSFLANIKDVWKQDNGKDYLQKQLSDINNTTSIINSTETEKMFSHKRALVVLDDVSDSDQLISLCRSCEWFGDGSVILITTREKYLLDLLELQYKYEMKEMGTSISLELFSWHAFKNSSPTKDLLKLSRRAISYCGGLPLALEVLGSLLLDRTTSEWKSVLKLLKRNQSNEVIDILKMSYDFLDDDEKKIFIEIACFYIGKDRHRITQLLNGCGLAAETGISKLIERSLLKVDQNNKLEMHDLLQEMGREMNHLNPKSKWIYDVFLSFRGGDTRQSFTAHLHAALKDAGIEVYMDEKLEKGENITSSLLQAIEGSRISIIIFSINYANSRWCLQEVEKIMECHRTTGQEVMPVFYGVEPSEVRNQIESFGEAFEGLVRRISATKNMIISWKRALSEAANLSGWTLNNYRTENELIDDIRRTVTRKLDDGSYLVVANHPVGVESRVQDIIQLLSGKSNEVCMVGILGMGRCGKTTIAKAVYNEINQNFEGKSFLADIREVWDQDGGKVHLQEQLLSGILKTRRMKINNIELGRTIIKESLCQERALVVFDDINNVDQLKALCGSRDWFGQGSRLIITTRDEHLLKVLKVENIYRMKEMDENESLELFCWHAFKQAAPSADFVELSRRVVAYSGRLPLALEVLGSYLFEREITEWKSALSKLEVIPNDQIQKKLRISYDGCDDMEKDIFLDICCFFIGKERNYVTQILDGCVRGAEIGITVLIERSLVKVGKNNKLEMHELLKVMGREIIRETKPENPEERSRLWFHDDVLDVMIKNIATIAVKGLAFSLPKTNDVVFETKAFMMMKRLRLLQLDNVKLTGDFEYVSEDLRWLCWHGYPLRYIPGNFYLEKLVAMDLKHSKLQLVWKEPQLLDRLKVLNLSHSHYLTRTPDFSGLPNLEKLILKDCPKLSEVHSTIGDLKYLILVNLKDCKSLSHLPRSLYKLKSLKSLVLSGCSKIDKLEEDIMQMESLTSLRTDNTAITQVPSSLVRLKNIKYVSLCNHEGLSRDVFPSLIWSFMSPRNLMCKVLGSFSSLLPSLSLGLSANNHVELESSTSHMTYAETSTLIDLQNSIHIAGSGNSSRSLVIQAGECNKATDTFTKNILQEWTSDGSSDSECSFPGDTRSKWLTFNGDSSLVFKVPNNGSKLKGMTLRIIYSSSLVNLAPECVLLNVFNYTKNTTLSYKLDTTTSLKDEEWQGLMSNLEPGDEVEIVIVLGHRFTVKKIVAHLIYKEITNHKIMECSSALDKGQI. | 1486 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g06353 | 1485 | SMART | till_3 | 10 | 153 | IPR000157 | GO:0007165 | |
Seca9g06353 | 1485 | SMART | till_3 | 500 | 639 | IPR000157 | GO:0007165 | |
Seca9g06353 | 1485 | SUPERFAMILY | "Winged helix" DNA-binding domain | 410 | 490 | IPR036390 | - | |
Seca9g06353 | 1485 | SUPERFAMILY | L domain-like | 990 | 1308 | - | - | |
Seca9g06353 | 1485 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 12 | 155 | IPR035897 | - | |
Seca9g06353 | 1485 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 501 | 1241 | IPR044974 | GO:0006952 | |
Seca9g06353 | 1485 | Gene3D | - | 341 | 423 | IPR042197 | - | |
Seca9g06353 | 1485 | Gene3D | - | 835 | 919 | IPR042197 | - | |
Seca9g06353 | 1485 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 497 | 667 | - | - | |
Seca9g06353 | 1485 | ProSiteProfiles | TIR domain profile. | 499 | 665 | IPR000157 | GO:0007165 | |
Seca9g06353 | 1485 | Gene3D | - | 497 | 662 | IPR035897 | - | |
Seca9g06353 | 1485 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 431 | IPR027417 | - | |
Seca9g06353 | 1485 | PRINTS | Disease resistance protein signature | 281 | 295 | - | - | |
Seca9g06353 | 1485 | PRINTS | Disease resistance protein signature | 374 | 388 | - | - | |
Seca9g06353 | 1485 | PRINTS | Disease resistance protein signature | 211 | 226 | - | - | |
Seca9g06353 | 1485 | Pfam | TIR domain | 501 | 665 | IPR000157 | GO:0007165 | |
Seca9g06353 | 1485 | Pfam | TIR domain | 13 | 149 | IPR000157 | GO:0007165 | |
Seca9g06353 | 1485 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 661 | 929 | IPR027417 | - | |
Seca9g06353 | 1485 | Gene3D | - | 5 | 180 | IPR035897 | - | |
Seca9g06353 | 1485 | ProSiteProfiles | TIR domain profile. | 9 | 177 | IPR000157 | GO:0007165 | |
Seca9g06353 | 1485 | Pfam | NB-ARC domain | 209 | 419 | IPR002182 | GO:0043531 | |
Seca9g06353 | 1485 | Pfam | NB-ARC domain | 681 | 907 | IPR002182 | GO:0043531 | |
Seca9g06353 | 1485 | Gene3D | Ribonuclease Inhibitor | 1026 | 1314 | IPR032675 | - | |
Seca9g06353 | 1485 | Gene3D | - | 663 | 830 | IPR027417 | - | |
Seca9g06353 | 1485 | Gene3D | - | 181 | 333 | IPR027417 | - | |
Seca9g06353 | 1485 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 497 | 642 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g06353 | Seca-Chr9 | 180596083 | 180609218 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g06353 | 6 | 490 | WRKY Transcription Factor Family | AT4G12020 | 26.113 | 6.71e-38 | 154 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g06353 | - | - | pcin:129288830 | 1346.64 |