Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06335 ATGGCTCACCATTACTCAAACAAGGCCTTAGGTTGCTTTCTCTTGTTTTCTATTTTTGTGTCTTCTCTTTCAACTTTTTCTCATGCTCATTTTGGATTCATTACTGATCCAAGAGAAAGAATATCACTCCCATTCCCAGAAGATGGTGGTGATGCTCCTGTACCAGCACCAGAATACGAAGTTGAGCCAACAGAAGAAAGGCTAAAAAACGCCCATGTTGCTCTCCAAGCATTGAAAGAGGCTATTTACTCTGACCCTTTTAATGTAACTGGTAATTGGGTTGGTAATGATGTTTGCTCCTACAATGGTGTGTTTTGTGCCCCTGCACTTGATGATTCCTCATTGGATGTGGTTGCTGGTGTTGATCTTAACCAAGCAGACATTGCTGGTCACCTCCCTGAAGAATTGGGTCTCTTGAAGGATGTTGCACTTTTCCACATTAACTCCAATAGATTCTGTGGAATTGTGCCACAAAGCTTAGAGAATCTCACTCTTATCCATGAGTTTGATATCAGCAACAACCGTTTTGTTGGTGGCTTCCCTTCTGTGGTCCTCAATTGGCCAAACTTGAAGTACTTGGATATCAGATTCAATGACTTTGAAGGAGCTTTACCTCCTGAGCTATTTCAGAAAGAACTTGATGCAATATTTTTGAACAACAACCGTTTCACATCTGTTATCCCAGAAACTCTAGGAAACTCCACAGCCTCAGTTGTTACCTTTGCTAACAATAATTTCTCAGGTTGCATTCCAAAATCAATAGGGAACATGGTGAACTTGAATGAGATTGTCTTCATGGGCAATGGCCTTGGTGGTTGCTTCCCACAAGAGATTGGAATGATAAAGGATGTGACTGTTTTGGATGCTAGCAATAATGAGTTTGTAGGGACTCTTCCTAACTTGTCAGGATTGAAGAAAGTTGAGGTCATAGACATAGCACACAACAATCTTACTGGATATGTGTCTAACACTATATGCCAGTTACCTTCTTTGAAGAACTTCACATTCTCTGACAATTACTTCAATGGGGAAGCTCAAGCTTGTGTGCCTTCATCCAATTCAGGTGTTGCTTTTGATGACTCAAGCAATTGTTTGCCAGGGAAGAAGAATCAAAAGACATCCAAACAATGTTTCCCAGTGCTAACTCGCCATGTGGATTGTAGCAAGCAATGTGGTGGTGGAGGCAGTGGTAATGACAAAGGGAATAGCAATGTCCCATCAACACCAAAGCCAACTCCTTCACCTTCACCTGTGACAGAACCACCACAGACACCAAAGGCTGAGCCACCACCAACACCAAAGGTTGAGTCACCTCCAACACCAAAGGCTGAGCCACCACAGACACCAAAGGCCAAGCCACCACCAACACCAAAGGCTGAACCACCACCAACACCAAAGGCTGAACCACCATCAACCCCAAAGGCTGAGCCACCACAAACACCAAAGGCAGAGCCACCGCCAACGCCAAAGGCTGAACCACCAAAAACCCCAAAGGCTGAGCCACCTCAAACACCTAAGGCTGAGCCACCTCAAACACCAAAGGTTGAACCACCTACAGTTCACTCTCCTCCACCCCCTGTCCACTCACCTCCACCACCTGTACACTCACCTCCACCACCTGTTCACTCTCCTCCACCACCGGTCCACTCACCTCCACCACCTGTGCACTCACCTCCACCACCAGTTCACTCTCCTCCGCCCCCTGTGTCCTCACCACCTCCACCAGTTTACTCTCCCCCACCCCCTGTCCACTCCCCACCACCACCAGTTCAATCTCCACCACCACCAGTCCATTCTCCACCTCCTCCGGTTCACTCTCCACCACCACCTGTCTACTCTCCTCCTCCCCCACCACCAGTTTACTCACCACCACCACCAGTTCATTCTCCACCTCCACCAGTGTACTCTCCACCACCACCACCCCCTGTCTACTCACCACCACCACCTGTTAACTCACCTCCTCCCCCAGTCCACTCCCCACCACCACCACCACCCGTCCACTCCCCACCACCACCAGTTTACTCTCCTCCTCCACCAGTCCACTCCCCACCACCACCACCGGTCCACTCCCCACCACCACCAGTTTACTCTCCTCCTCCACCAGTCCACTCACCACCACCACCACCACCAACATGGGATGATATCATCCTCCCACCAATCTTCGGATCTGAATACAGGTCACCTCCACCACCAACAATTGCTGGATACTAA 2211 0.4862 MAHHYSNKALGCFLLFSIFVSSLSTFSHAHFGFITDPRERISLPFPEDGGDAPVPAPEYEVEPTEERLKNAHVALQALKEAIYSDPFNVTGNWVGNDVCSYNGVFCAPALDDSSLDVVAGVDLNQADIAGHLPEELGLLKDVALFHINSNRFCGIVPQSLENLTLIHEFDISNNRFVGGFPSVVLNWPNLKYLDIRFNDFEGALPPELFQKELDAIFLNNNRFTSVIPETLGNSTASVVTFANNNFSGCIPKSIGNMVNLNEIVFMGNGLGGCFPQEIGMIKDVTVLDASNNEFVGTLPNLSGLKKVEVIDIAHNNLTGYVSNTICQLPSLKNFTFSDNYFNGEAQACVPSSNSGVAFDDSSNCLPGKKNQKTSKQCFPVLTRHVDCSKQCGGGGSGNDKGNSNVPSTPKPTPSPSPVTEPPQTPKAEPPPTPKVESPPTPKAEPPQTPKAKPPPTPKAEPPPTPKAEPPSTPKAEPPQTPKAEPPPTPKAEPPKTPKAEPPQTPKAEPPQTPKVEPPTVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVYSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVYSPPPPPPVYSPPPPVHSPPPPVYSPPPPPPVYSPPPPVNSPPPPVHSPPPPPPVHSPPPPVYSPPPPVHSPPPPPVHSPPPPVYSPPPPVHSPPPPPPTWDDIILPPIFGSEYRSPPPPTIAGY. 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06335 736 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 71 369 - -
Seca9g06335 736 PRINTS Proline rich extensin signature 422 438 - -
Seca9g06335 736 PRINTS Proline rich extensin signature 442 454 - -
Seca9g06335 736 PRINTS Proline rich extensin signature 405 417 - -
Seca9g06335 736 PRINTS Proline rich extensin signature 457 478 - -
Seca9g06335 736 Gene3D Ribonuclease Inhibitor 69 367 IPR032675 -
Seca9g06335 736 MobiDBLite consensus disorder prediction 394 736 - -
Seca9g06335 736 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 15 521 - -
Seca9g06335 736 Pfam Leucine rich repeat N-terminal domain 74 106 IPR013210 -
Seca9g06335 736 MobiDBLite consensus disorder prediction 408 715 - -
Seca9g06335 736 SUPERFAMILY L domain-like 73 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06335 Seca-Chr9 180268763 180271090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06335 1 525 Trihelix Transcription Factor Family AT3G19020 53.737 4.45e-176 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06335 - - aprc:113870095 594.734