Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06323 ATGAAGCTCTCTTCTTCTCGTGCACCTTCAATTTGCACAACACTTGTTCGATTGACACTACTGTTATTTGTTGTTTCTTGCAAAACAAAGGGTCTTGTGAAACTGCCACCAAATGTTACGTTTCCAGCAGTGTTGGTGTTTGGAGATTCTATCATGGATACGGGCAACAACAACAACATGAAAACTCTAAGTCGGTGCAATTTCTTTCCATATGGAAAAGATTTTCAAGGAGGGATCCCAACTGGCCGATTTAGCAATGGAAAGGTTCCATCAGACATTATAGTTGAAGAATTAGGCATTAAAGAGTTTCTACCAGCATACTTGGATCCAAATCTCCAGCCTAGTGAACTGGCCACCGGTGTGTGTTTTGCATCTGGTGGCGCTGGATACGATCCTTTGACATCACAAGTAGCGTCAGCAATATCACTATCTGGTCAACTAAACTTATTCAAAGAATACATAGAGAAGCTGAAGGGACTAGTTGGAGAAGACAGAACAAACTTCATCTTAGCCAACAGTCTTTATCTTGTGGTATTAGGAAGCAATGACATTTCCAACACGTACTTCATGTCTCACATTAGACAAAACCAATATGATTTTCCTACTTACGCGGACCTTATGGTCAACTCTGCTTCTAGTTTCTTCAAGGAAATATATGAATTGGCCGGTGCACGGAGGATTGGAGTATTCAGTGTGCTGCCAATTGGATGTGTGCCGCTTCAGAGAACAATTGCGGGAGGAATAGCAAGAAAATGTGTGGGAAAGTATAACGATGCAGTGGTGGTATTTAACAACAAACTGTCAAAGGAGATTGATTCCATTAATAAGAACTTTCCAGATAGCAGGATTGTTTACATTGATGTGTACAACCCTCTACTTGATATCATTGTAAACAACCAAAAATATGGCTATGAAGTGGGAGACAGAGGGTGTTGTGGCACAGGCATTGTTGAGGTTATATTCTTATGCAACCGTTTGGAGCCCACGTGTCCCAACGTTTCAGAGTATGTGTTTTGGGACAGTATTCATCCAACTGAAACCGTTTACAAAATGCTCACACTCGCAATTCTACCAAAATATATATACCAGTTCGAGTGA 1098 0.4089 MKLSSSRAPSICTTLVRLTLLLFVVSCKTKGLVKLPPNVTFPAVLVFGDSIMDTGNNNNMKTLSRCNFFPYGKDFQGGIPTGRFSNGKVPSDIIVEELGIKEFLPAYLDPNLQPSELATGVCFASGGAGYDPLTSQVASAISLSGQLNLFKEYIEKLKGLVGEDRTNFILANSLYLVVLGSNDISNTYFMSHIRQNQYDFPTYADLMVNSASSFFKEIYELAGARRIGVFSVLPIGCVPLQRTIAGGIARKCVGKYNDAVVVFNNKLSKEIDSINKNFPDSRIVYIDVYNPLLDIIVNNQKYGYEVGDRGCCGTGIVEVIFLCNRLEPTCPNVSEYVFWDSIHPTETVYKMLTLAILPKYIYQFE. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06323 365 Gene3D SGNH hydrolase 34 359 IPR036514 -
Seca9g06323 365 Pfam GDSL-like Lipase/Acylhydrolase 44 352 IPR001087 GO:0016788
Seca9g06323 365 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Seca9g06323 365 SUPERFAMILY SGNH hydrolase 173 357 - -
Seca9g06323 365 PANTHER GDSL ESTERASE/LIPASE EXL3 24 353 - -
Seca9g06323 365 FunFam GDSL esterase/lipase APG 33 361 - -
Seca9g06323 365 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06323 Seca-Chr9 180064267 180067620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06323 38 353 Pollen Coat Proteome AT1G75910 41.379 1.15e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06323 - - gmx:100777186 545.428