Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06313 ATGGGGAAAGAAGAATCCAATAGAACCAATAAATTTGGTACACCTTACAAATTTATGGTGCCTCAAGATGTGACTCATGAAACTCTAAACAAACCTATTCAACCACTTTGGACTACTTCTATGCAGGCACATTACAATCCTGGGTTACCTACAATTCCCATTTTAAATCCACATGCTGCCAATTCATACTTGCATCGCTATGTGTTGCCAAATCAGGCAAATAGCACACTACTTCAACGTGATGCTCCGCATGACCCCAGCAAGCTTTCCAATAAAATTCCACCAGTTAAGGATGCTGCATTGGCTTTTTCGGAAATGGTACACAAGACTTTCGGTGAAAAAAGCCAGTGTTCGATGGAAAGAATTGCCAGAACCTTACAACCTGAAAATTTAATGTTCGGGGAAGCAAGAAAAAATGGAAGTGGATCTTCAATACCAAAAAATGACACTGATGGAATGTCAAGGAGTGCAGCAACTGGAAACAAGGGATCACCAGATGAAACACATGACACTAACAATGATTTTCCTTCAACCAAAGAGGGTCAATCTAATATAATGCTTGGAAATGAAAATTCAACCCTTGATAATCAGAATTTGGAAACAGGTCTCAATGCATCTGGCACTACTGCTTGCCTCACAAAGCTGGATTTTCCTTCAACCAAAGAGGATCAATCTAATATAATGCTTGGAAATGAAAATTCAACCCTTAATCAGAATTCGGAAACAGGTCTCAATGCATCTGGCACTACTGCTTGCCTCACAGAGCTGGATGATGAGGATGAAATAAGAAGAGAGAGAAAAAGACAATCAAACAGGGAATCGGCTAAGAGATCAAAGCTACGGAAACTGCGCGAATGTAAAGAGCTACATAAAGACTGGGACACTCTTAAGGATGAAAACTCCTTGCTTACACAAGAGCTCAAAATGCTTTCTGAGGAATGTCTGGAGCTCAGCAATGAAAACGATGCCATACAGGAAGAGCTGATTAAGATGTATGGACCAGAATCAATAGCAGATCTATTGGCCATGAAGCCTGTCTAA 1041 0.4035 MGKEESNRTNKFGTPYKFMVPQDVTHETLNKPIQPLWTTSMQAHYNPGLPTIPILNPHAANSYLHRYVLPNQANSTLLQRDAPHDPSKLSNKIPPVKDAALAFSEMVHKTFGEKSQCSMERIARTLQPENLMFGEARKNGSGSSIPKNDTDGMSRSAATGNKGSPDETHDTNNDFPSTKEGQSNIMLGNENSTLDNQNLETGLNASGTTACLTKLDFPSTKEDQSNIMLGNENSTLNQNSETGLNASGTTACLTELDDEDEIRRERKRQSNRESAKRSKLRKLRECKELHKDWDTLKDENSLLTQELKMLSEECLELSNENDAIQEELIKMYGPESIADLLAMKPV. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06313 346 PANTHER G-BOX-BINDING FACTOR 3-RELATED 32 334 IPR044827 GO:0003700|GO:0006355|GO:0043565
Seca9g06313 346 Pfam bZIP transcription factor 259 321 IPR004827 GO:0003700|GO:0006355
Seca9g06313 346 Coils Coil 293 327 - -
Seca9g06313 346 SUPERFAMILY Leucine zipper domain 262 318 IPR046347 GO:0003700|GO:0006355
Seca9g06313 346 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 261 324 IPR004827 GO:0003700|GO:0006355
Seca9g06313 346 Gene3D - 258 321 - -
Seca9g06313 346 MobiDBLite consensus disorder prediction 175 200 - -
Seca9g06313 346 CDD bZIP_plant_GBF1 264 314 IPR045314 GO:0003700|GO:0006355
Seca9g06313 346 SMART brlzneu 259 323 IPR004827 GO:0003700|GO:0006355
Seca9g06313 346 MobiDBLite consensus disorder prediction 141 166 - -
Seca9g06313 346 MobiDBLite consensus disorder prediction 128 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06313 Seca-Chr9 179889849 179896073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06313 15 340 bZIP Transcription Factor Family AT4G36730 26.829 8.90e-19 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca9g06313 bZIP_1 2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06313 K09060 - gmx:102665715 306.605