Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06267 ATGGAAGATAAATTTGAGATTATGTCAAGTCAAGTTATAAAGCCATCTTTTACAACCCCTCATCATCTCAAGTACTTCAAACTCTCATTTCTTGAACAAATTTCACCATATCAATACGTTTCAGTTCTCTTCTTTTACTCTGCATCTGATGTCAGTGGTTACGAAACTGGCTCTACATCCCTGTGTGATCATTTGAAGGCTTCTTTATCAAATGTGTTAAACCTTTACTACCCACTTTGTGGAAGAATCAAAGGAAATGCCTACATTGACTGTAGTGATGCAGGTGTGCCTTTCATTGAGGCTAAAGTTTCCTCCCATCTCTCTTCCATCCTAGAATACCCACAGGTCAATATCTTGAAACAATTACTTCCACTTGATCCATATGAACCAGTATTTGAAAATGTTAACTATGAGGAACTAGTCATATTGGCAGTTAAATTTAGCAAACTAAGTTGTGGTGGTGTAGTACTTGGTGTTTGCATGTCACACAAGATTGTTGATGGTATAGGGATGACTTCTTTCCTCAATGCTTGGGTTGAAACAATGAAGGTAAGTGGCAACCCAAAAAAACCTTACATGGAAGCAAGTTCATTATTTCCTACGAAAGACGTGCATTTTATTACTCTACCATCTGGTATGGTTGAAAACAAGGAACTTGTAACTGCAAGATTAGTGTTTGATGGGGAAAGCTTGTCTAGGCTAAGAGACGAAAATAATAGCTATCGTCCCACTAGGGTTGAAGTTGTGACGGCTCTTATATGGAAATCAATGATGGAGGCAACCATAGGGTGCTCGAGGGGGGGGAAACTTGTAAGGTCTTTTGCATCACATGTTGTGAATATTCGTAGTCGTATGGTGCCACCATTGCCAGAGAACAGCATAGGAAATGTTGTTCATTTTGTTGTGACACCATTAGTTGAATTCGAAGTGGACAAAAGTGTTGGGTTGCAAGATTTGGCAGTAATGGTTAAGAAAGAGATAAGGAGACTTGATGCAGATTATGTGAGTAAACTTGGAGATGATGGCGGGTTTGATTGGATTATGGAGTCTAGAGAGAAATTGAAGCTTATGATCTCTAAGGACATTCAATGGTCTAAGTTTTCTAGTTGGACAAGATTTCCTTTATATGAAATTGATTTTGGATGGGGAAAGCCAACTTGGGCGAGTAGTCTTTGTTTTCCTTCAAGAGATAATGTCAAATTGTTGCCCACAAGATGTGGGAAAGGGATAGAGGCATGGGTTATCTTGGATAAAGAGGTTATGGTTCAATTTGAGCGTAACCAAAAGCTTCTACAATATGCATCGATCTTACGTGCCTCTTGA 1323 0.39 MEDKFEIMSSQVIKPSFTTPHHLKYFKLSFLEQISPYQYVSVLFFYSASDVSGYETGSTSLCDHLKASLSNVLNLYYPLCGRIKGNAYIDCSDAGVPFIEAKVSSHLSSILEYPQVNILKQLLPLDPYEPVFENVNYEELVILAVKFSKLSCGGVVLGVCMSHKIVDGIGMTSFLNAWVETMKVSGNPKKPYMEASSLFPTKDVHFITLPSGMVENKELVTARLVFDGESLSRLRDENNSYRPTRVEVVTALIWKSMMEATIGCSRGGKLVRSFASHVVNIRSRMVPPLPENSIGNVVHFVVTPLVEFEVDKSVGLQDLAVMVKKEIRRLDADYVSKLGDDGGFDWIMESREKLKLMISKDIQWSKFSSWTRFPLYEIDFGWGKPTWASSLCFPSRDNVKLLPTRCGKGIEAWVILDKEVMVQFERNQKLLQYASILRAS. 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06267 440 PANTHER F21J9.9 6 435 - -
Seca9g06267 440 Gene3D - 216 435 IPR023213 -
Seca9g06267 440 Pfam Transferase family 4 430 - -
Seca9g06267 440 Gene3D - 3 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06267 Seca-Chr9 179100050 179101372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06267 4 426 Monolignol Biosynthesis Gene Families AT5G48930 24.724 1.80e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06267 - K13065 egr:104439641 357.451