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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca9g06265
ATGTATTTCCATCATGACACTAATGCTTTTAATTTCAAGTTCAACAAAGTAATTCAAGATCCGGAACGACAAAAGAAAGAACTCAGGATTCCCCCTGCTGTTGTGATGAAATATTGGAAAGCAATGTCAAATCCAATACATCTCAAACTTCCAAATGGTGCTGGATGGGAAATATCATGGGAAAGTCATGATAGTGGCATTTGGCTTAAGAAAAATTGGAATAAATTTGCACAATCACTATCACTTGGTTATGGATATTTTTTAGTTTTCAAGTATATAGGAGGATCTAATTTTCTTGTTGAGGTATTTCATTATAATAGTTTAGAAATAGACTATTCAAGTATAAGATGCATCAATGATGATGAAGGTTCCAACGAACATGATAAACAAGTTTTGGAGCACAATGATTGTGTGGAGATTGTGGATCAATGTGAAAGATCCACACAACCTCTTAAGAAAAAGAAAGCCAACCCAAGTGAAGAATGTAAAAACTACAACAATCCACATTTTGAAGCTAACAATGCTCCATCTAAGAGGATAAGGATTAATGGCAAGAGAAAAATGAATGCAGGGGCTAACAGGGGAGACATAGTTAAAGCCAAGAATTACTCATCAAAAGCTGAAGTTGTTAAAGAGATGATGGCCAAGAATTTTCATTTGGAGAACCCTCTTTTCATACTTATATTGAAGCCAAGTTATGTGCAGAGCAATATATTGGTACTAATTTTACTATATTGTATGGGTTTGTTGAACCAATCAACACATGTTATAAAAATTGTTTAA
783
0.3372
MYFHHDTNAFNFKFNKVIQDPERQKKELRIPPAVVMKYWKAMSNPIHLKLPNGAGWEISWESHDSGIWLKKNWNKFAQSLSLGYGYFLVFKYIGGSNFLVEVFHYNSLEIDYSSIRCINDDEGSNEHDKQVLEHNDCVEIVDQCERSTQPLKKKKANPSEECKNYNNPHFEANNAPSKRIRINGKRKMNAGANRGDIVKAKNYSSKAEVVKEMMAKNFHLENPLFILILKPSYVQSNILVLILLYCMGLLNQSTHVIKIV.
261
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca9g06265
260
ProSiteProfiles
B3 DNA-binding domain profile.
13
106
IPR003340
GO:0003677
Seca9g06265
260
CDD
B3_DNA
28
103
IPR003340
GO:0003677
Seca9g06265
260
PANTHER
B3 DOMAIN-CONTAINING
10
193
-
-
Seca9g06265
260
SUPERFAMILY
DNA-binding pseudobarrel domain
14
106
IPR015300
-
Seca9g06265
260
Pfam
B3 DNA binding domain
20
103
IPR003340
GO:0003677
Seca9g06265
260
MobiDBLite
consensus disorder prediction
149
168
-
-
Seca9g06265
260
SMART
B3_2
14
106
IPR003340
GO:0003677
Seca9g06265
260
Gene3D
-
7
107
IPR015300
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca9g06265
Seca-Chr9
179067105
179068306
Dispersed/Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca9g06265
14
259
B3 DNA Binding Superfamily
AT3G18990
27.698
3.75e-19
84.0
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Seca9g06265
B3
2.1e-08
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca9g06265
-
-
lja:Lj0g3v0114559.1
198.364
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