Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06262 ATGATACCACGGTTATTTGCATATGCTTTGGTATGGTTTGTTGCCCTTGATTCTCCTTTTACATTTGTTACTGCGTTAGAGCAGGAATACAAGAGTGACATCTTTGGGGAGAAGGGAATTTTACTTGGTGTTGTTCATGGAATTGTTGAATCCCTACTTAGGAGGTACATTGAAAATGGAATGAGTGAAGATCTGACTTATAAGAACACTGTTGAGTCTGTAATAGGAATTATACCTAAAACCATCTCAAATGGAAAAAGAGAATTTGAAAAAGCATATAGTGCTTCTTATTATCCATGCATGGACATTTTGTATGAGTGCTATGAGGTTGTAGCTAGTGGTAGCAAGATTCGTAGTGTTGTTCCAAAGGATGTCAATGTTGCAGTTGGCACCATCAAAACAAAGAGGACTGTTCAGTTTGTTAAATCTGTGGAGATGCACCATGAGGCTCTCCAAGAGGCACTACCAGGTGACAATGCAGTATTCAATGTGAAGAATGTTACAGTCAAGTATCTCAAGCGTGTTTTTGTTGCCTCAAATTCAGCGCGAAGTATCAGCCCTGATGAGAGGAAACTTTTATATGAATTATTCCAGAAGCAGAGGCATGTTGCTGGGAGATCTGCAATGGTCAACCAGCTTCCAGTGGTGCAGATGCTGCTATCGAAACTTGTGGTTGTTTCAGTAGGTTATTGCTGGAATAAGGGGTGTTCAAATCCAATCCAATCCAATTGGAACCGCAATAACCGATCCAAAAAACCACAAACCGAAATAACCGCAAACCGAAAAAACTGTAAATCGCAAAAATCGAAATCTTTTATTGGATTGAATTGGATTTCGGATTTTCCTTGA 849 0.3946 MIPRLFAYALVWFVALDSPFTFVTALEQEYKSDIFGEKGILLGVVHGIVESLLRRYIENGMSEDLTYKNTVESVIGIIPKTISNGKREFEKAYSASYYPCMDILYECYEVVASGSKIRSVVPKDVNVAVGTIKTKRTVQFVKSVEMHHEALQEALPGDNAVFNVKNVTVKYLKRVFVASNSARSISPDERKLLYELFQKQRHVAGRSAMVNQLPVVQMLLSKLVVVSVGYCWNKGCSNPIQSNWNRNNRSKKPQTEITANRKNCKSQKSKSFIGLNWISDFP. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06262 282 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 8 126 IPR013023 GO:0009082|GO:0016491
Seca9g06262 282 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 27 122 IPR008927 -
Seca9g06262 282 Gene3D - 20 154 IPR013328 GO:0016491
Seca9g06262 282 SUPERFAMILY Translation proteins 126 171 IPR009000 -
Seca9g06262 282 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 27 123 IPR000506 GO:0004455|GO:0009082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06262 Seca-Chr9 179043302 179044189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06262 127 181 Eukaryotic Initiation Factors Gene Family AT5G60390 61.905 9.98e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06262 K00053 - ming:122094170 183.341