Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06244 ATGGACACAATATTCAGTTTCATACTCCTCTTTCTCTTAACCTTCACTTTCTTTCTCCGTTCCTTGCTTTCAAAGAGACACAAACTCCCTCCAGGACCACATGGTCTTCCCATTATCGGAAACCTCCATCAATTGGGCCAAAAGCCCCACCAAACCTTGGCCCGCCTCGCCAAGATCCACGGCCCAATCATGAGCCTCAAGCTTGGCCAAGTAACCACCATAGTCATGTCTTCTTCCGAGACAGCCAAACAAGTGCTCCAAATCCATGACCAATTCTTATCCAACAGAAAGATCCCTGATGCAATGAGAGGTGCCAGCCATGACCAATACTGCCTGGCCTTCCTCCCAGTCTCACAACACTGGCGTGACCTTAGAAAAATCTGCAACAACCTTCTATTCTCCAACAAGACCCTTGAAGGCAGTGAAGAGCTCAGGCGCAAGAAGGTTCTAGAACTTTTCAACGACATCCATGAGAGCATGTTAAAGGGTGAAGTTGTTGACATAGGAAGGCTGGTTTTCAAGACAACGCTAAACTTGTTGTCGAACACTATTTACTCAGAGGATTTGATTCACTCTGCGGACAAAGCAGGGGAATTGAAGGAGGTGGTTGCGAATATTATGAAAGAGATTGGGAGGCCAAACTTGGCGGATTGTTTTCCTGTGTTGAAGGTGGTTGATCCACATGGGATTAGAAGGCGCACAGGTGGTTACTTAGGGAAGTTGTTGAACATCGTCAAGGGGTTGGTTGACCAAAGGGTGAAGGTGAGGAAACAGAGTGGTTATTGTTCCAAAAATGACATGTTGGATGCTATGCTTGACAATGGTGATGATGCGGAGGAGGAGATGTATAAAGATAAGATTGAGCGTTTGTCATTGGACTTGTTTGTGGCAGGTAATGACACAGTTGTAACTATGGTAGAATGGACAATGGCTGAGTTACTTTATAACCCGGATGTCATGTCTAAAGCAAAAGTAGAGTTAGAGAAAACTATTGGTAAAGGTAACTTGGTTGAAGAATCAAACATTAGGAGACTTCCTTACTTAAATGCAATAGTGAAAGAAACTTTTAGGTTACATCCAGCAGCACCACTTTTACTCCCTCGTAAAGTCGAAGTGGATCTGGAGATAAATGGTTATACGGTCCCAAAGGGTGCACAAGTGTTGGTTAATGTGTGGGCTATTGGGAGAGATCCCAATTTATGGGACAATTCGAATGTGTTTTCACCTGAAAGGTTCTTGGGTTCAGAAATTGACTTTAAAGGTCGAAATTTTGAGTTGACACCATTTGGTGCTGGGCGGAGAATATGTCCCGGCTTGCCATTGGCAGTAAGGTTGTTGTTCTTGATGTTGGGTTTGCTTATCAATTGCTTTGACTGGGAGCTTGAAGGTGGAATGAAACCAAAGGATATGAATATGGAAGAGAAGTTTGGGCTTACCTTACAGAAGGCTCAACCTATTCGAGTTGTTCCAATCAAAGTAAACAATTGA 1488 0.4375 MDTIFSFILLFLLTFTFFLRSLLSKRHKLPPGPHGLPIIGNLHQLGQKPHQTLARLAKIHGPIMSLKLGQVTTIVMSSSETAKQVLQIHDQFLSNRKIPDAMRGASHDQYCLAFLPVSQHWRDLRKICNNLLFSNKTLEGSEELRRKKVLELFNDIHESMLKGEVVDIGRLVFKTTLNLLSNTIYSEDLIHSADKAGELKEVVANIMKEIGRPNLADCFPVLKVVDPHGIRRRTGGYLGKLLNIVKGLVDQRVKVRKQSGYCSKNDMLDAMLDNGDDAEEEMYKDKIERLSLDLFVAGNDTVVTMVEWTMAELLYNPDVMSKAKVELEKTIGKGNLVEESNIRRLPYLNAIVKETFRLHPAAPLLLPRKVEVDLEINGYTVPKGAQVLVNVWAIGRDPNLWDNSNVFSPERFLGSEIDFKGRNFELTPFGAGRRICPGLPLAVRLLFLMLGLLINCFDWELEGGMKPKDMNMEEKFGLTLQKAQPIRVVPIKVNN. 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06244 495 Gene3D Cytochrome P450 18 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 CDD CYP76-like 57 490 - -
Seca9g06244 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Seca9g06244 495 FunFam Cytochrome P450 76C4 22 489 - -
Seca9g06244 495 Pfam Cytochrome P450 30 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06244 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 492 - -
Seca9g06244 495 SUPERFAMILY Cytochrome P450 30 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06244 Seca-Chr9 178746701 178750424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06244 4 492 Cytochrome P450 AT2G45550 46.263 7.22e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06244 - - lja:Lj2g3v0039250.1 682.174