Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06243 ATGTCAGAGTCAAACGCCATAGCTAATGGTTTGGCTGGGGCAGGTGGTGGTATAATTGCTCAAATCATAACTTATCCTCTTCAAACGGTGAACACACGCCAACAAACTGAGAGAACACTCAAGAGGAACAAGCAAAGTTTGCTTCCTAACTCTTCCAACACAAATACCACTGCTTCTACTCCTGGCACTCTTCTTCAGATCTTTCAGGTAATTGGAAATGAGGGCTGGGGTGGACTCTATAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTACTTCTATCAAGTTTTCAAGAACAAAGCTGTGGCCATTGCAGCTGCCCGGAAAATCAAAGGGCATGGAGATGGTACTGTTGGAATGTTTGGTTGGCTCGTTGTGGCTGCAATTGCGGGGTCCTTTAATGTATTGCTAACAAACCCAATATGGGTTCTAGTGACTCGTATGCAGACACATACTCAAGCAGAAAGAAAAATCATGGAGGAGAAGAAAGAAGCTCTAAGGATAGCTGCTTCTGAAAGCAGCTTAGCAGGCTCAACATTAGAAGACAAATTGGATGAACTGAATTCAAAAAAGCCTCGACCATATGGAACTATACATGCAGCAAATGAAGTCTATAATGAAGCTGGTATAGTTGGATTTTGGAAGGGTGTCATCCCTGCTCTCATTATGGTATGCAATCCATCAATCCAGTTTATGATTTATGAGAGTTCATTAAAACATCTAAGGGCAAGACGCTCTGCTAAAAAGCAGGGGAATACAAGTATATCTGCTTTGGAGGTATGGAGTACTTTTAAATGCAACAAGTGGAAAGTATGTTGTAGGAGAGCATTTTAA 855 0.4222 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLLPNSSNTNTTASTPGTLLQIFQVIGNEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKIKGHGDGTVGMFGWLVVAAIAGSFNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEALRIAASESSLAGSTLEDKLDELNSKKPRPYGTIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRARRSAKKQGNTSISALEVWSTFKCNKWKVCCRRAF. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06243 284 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 247 IPR018108 -
Seca9g06243 284 Gene3D Mitochondrial carrier domain 11 273 IPR023395 -
Seca9g06243 284 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 267 IPR044712 GO:0006862|GO:0055085
Seca9g06243 284 SUPERFAMILY Mitochondrial carrier 5 255 IPR023395 -
Seca9g06243 284 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 107 IPR018108 -
Seca9g06243 284 Pfam Mitochondrial carrier protein 4 106 IPR018108 -
Seca9g06243 284 Pfam Mitochondrial carrier protein 125 248 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06243 Seca-Chr9 178710606 178713285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06243 26 270 Chloroplast and Mitochondria Gene Families AT2G47490 25.506 3.38e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06243 K13354 - gmx:100775304 431.409