Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06242 ATGTCTGTATATTTTCCCTTGCTGTGCATATCAGTAAGCATCCTCTTGTCATTCAAAAAGGTCTTTTTGGTGGGAGCAATAGCAAAACTTGGAGCAACTGTCACAACATATCCCTTACTAGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGTAACTCATTAAGATACTCAGGTACTTTTGATGCTGTGCTTAAAATGATCCGTTATGAAGGATTGTCTGGCTTTTATAAGGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCAGCTTCTGTTCTTTTCATGGTTAAGGAGGAGCGTGTTAAGGCTTTCATGGTGGTGGCAGATAAGAGCAAAAAAGTTGTATCAAATGTGAGTAGATGA 375 0.3947 MSVYFPLLCISVSILLSFKKVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGSNSLRYSGTFDAVLKMIRYEGLSGFYKGMSTKIVQSVFAASVLFMVKEERVKAFMVVADKSKKVVSNVSR. 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06242 124 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
Seca9g06242 124 Pfam Mitochondrial carrier protein 18 108 IPR018108 -
Seca9g06242 124 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 111 IPR044712 GO:0006862|GO:0055085
Seca9g06242 124 SUPERFAMILY Mitochondrial carrier 16 102 IPR023395 -
Seca9g06242 124 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 107 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06242 Seca-Chr9 178708701 178710590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06242 16 117 Chloroplast and Mitochondria Gene Families AT2G47490 35.294 1.30e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06242 K13354 - gmx:100777898 186.422