Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g06241 | ATGATGAGGAGATACCAGAGGAGGAAGTTGAATTTGGAGTTGGACCTGAACCAAACTCCGCCAGCGGAGGAACCTTCTGCTCCCCAACAGCTGCAGCAGCCAATTACGATTGACGTGGAGGCCATTGATGATGATGTTATTGAATCCTCACCCAGGGCTTTTGCTCAGGCTAAGACCAATGCGAGGAGGAATCGGAGGAGGACTATAGTTGACGTGGATTCGGAAAATCAGACCAGGGCAACTAATAATGATCACAGAGGATGCGGAAGAGATCGCTCAATCCAACGAATTATTAACAGTGATCTTTATATCAATTTGGAAGGCAGTAGCAGTTCTTTGAATAAGAATGCTAGAAAATCACCTGAACGTCCTGAACCTCCAAAGGAGCCTGTCTTTAACTGCCCAATATGTATGGCTCCTTTGACAGAAGAAATGTCAACAAGGTGTGGTCATATTTTTTGCAGGAAGTGCATTAGAACTGCTATAAATACACAGGGTAAATGCCCTACTTGTAGGAAAAAGGTTACTATGAGAGAGCTGATAAGGGTGTTTCTTCCATCAGCTAGTTGA | 570 | 0.4421 | MMRRYQRRKLNLELDLNQTPPAEEPSAPQQLQQPITIDVEAIDDDVIESSPRAFAQAKTNARRNRRRTIVDVDSENQTRATNNDHRGCGRDRSIQRIINSDLYINLEGSSSSLNKNARKSPERPEPPKEPVFNCPICMAPLTEEMSTRCGHIFCRKCIRTAINTQGKCPTCRKKVTMRELIRVFLPSAS. | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g06241 | 189 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 107 | 187 | IPR013083 | - | |
Seca9g06241 | 189 | PANTHER | ELFLESS, ISOFORM B | 3 | 187 | - | - | |
Seca9g06241 | 189 | ProSiteProfiles | Zinc finger RING-type profile. | 134 | 172 | IPR001841 | - | |
Seca9g06241 | 189 | SMART | ring_2 | 134 | 171 | IPR001841 | - | |
Seca9g06241 | 189 | ProSitePatterns | Zinc finger RING-type signature. | 149 | 158 | IPR017907 | - | |
Seca9g06241 | 189 | SUPERFAMILY | RING/U-box | 133 | 178 | - | - | |
Seca9g06241 | 189 | Pfam | Zinc finger, C3HC4 type (RING finger) | 133 | 171 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g06241 | Seca-Chr9 | 178673286 | 178677036 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g06241 | 8 | 187 | C3H Transcription Factor Family | AT5G48655 | 48.223 | 3.44e-44 | 144 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g06241 | K22651 | - | cave:132188663 | 212.616 |