Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06216 ATGGACACAATATTCAGTTTCATACTCCTCTTTCTCTTAACCTTCACTTTCTTTCTCCGTTCCTTGCTTTCAAAGAGACACAAACTCCCTCCAGGACCACATGGTCTTCCCATTATTGGAAACCTCCATCAATTGGGCCAAAAGCCCCACCAAACCTTGGCCCGCCTCGCCAAGATCCACGGCCCAATCATGAGCCTCAAGCTCGGCCAAGTAACCACCATAGTCATGTCTTCTTCCGAGACAGCCAAACAAGTGCTCCAAATCCACGACCAGTTCTTATCCAACAGAAAGATCCCTGATGCAATGAAAGGTGCTGGTCATGACCAATACTGTTTGCCCTTCATCCCAGTCTCACATCGCTGGCGTGACCTTAGAAAAATCTGTAACAACCTTCTATTCTCCAACAAGACCCTTGACGCCAGTGGAGAACTCAGGCGCAAGAAGGTTCTAGAACTTTTCAATGACATCCATGAGAGCATGTTAAAGAGTGAAGTTGTTGATATAGGGAGGCTGGCTTTTAAGACAACGATAAACTTGTTGTCGAATACGGTTTACTCAGAGGATTTGATTCACTCTGCGGACAAAGCAGGGGAGTTCAAGGAGGTGGTTGCGAATATTATGAAAGAGGTTGGGACACCAAATTTGGCGGATTGTTTTCCTGTGTTGAAGGTGGCTGATCCACATGGGATCAGAGGGCGCACAGGTAGTTACTTTTGGAAGCTGTTGACCATCTTCAAGGGGTTGGTTGACCAAAGGGTGAAGCTGAGGAAACAGAGTGGTTGCTGTTCCAAAAATGACATGTTGGATGCTATGCTTGATAATGCAGATGCTGAGGAAATGTACGACTTGTTTGTGGCAGGTACTGATACAGTTACGTCTACGGTAGAATGGGCAATGGCTGAATTACTTCATAACCCAAATGTCATGTCTAAAGCAAAAGCAGAGTTAGAGCAAACTGTTGGCAAAGGTAACCTGGTTGAAGAGTCAGACATTGGGAGACTCCCTTACTTAAATGCATTAGTGAAAGAGACTTTCCGATTACACCCAGCAGTGCCATTTTTGCTCCCTCGTAAAGCCGAAGTGGATCTGGAGATAAATGGCTATATGGTTTCAAAGGGTGCACAAGTGTTGGTTAATGTGTGGGCTATTGGGAGAGATCCCAATTTGTGGGACAATCCGAATGTGTTTTCACCTGAGAGGTTCTTGGGTTCAGAAATTGACTTTAAAGGCCGAAGTTTTGAGTTAACACCATTTGGTGCTGGGCGGAGAATATGTCCTGGCTTGCCATTGGCAATAAGGTTGTTGTTCTTAATGTTAGGTTTGCTTATCAACTGCTTTGATTGGGAGCTTGAAGGTGGAATCAAACCAGAGGACATGAATATGGAAGAAAAGTTTGGTCTTACCTTAGAGAAGGATCAACCCGTGCGAGTTGTTCCAATCAAAGCCAATAATGACTCCCTGCATTCAAAGAGACACAAACTCCCACCCGGACCACGTGGACTTCCCATTGTTGGAAACCTCCCCCAACTGGGCCAACAGCCCCACCAAACCATGGCCAGTCTCGCCAAGATCCACGGCCCAATCATGAGCCTCAAGCTCGGCCAAGTAACCACCATAGTCATGTCTTCTTCCGAGACAGCAAAACAAGTGCTCCAAATCCACGACCAGTTCTTACCCAACAGAAAGATCCCTGACGCAGTGAGAGCTGCCAACCATGACCAATACTGCTTGCCCTTCCTCCCAATCTCACATCGCTGGCGTGACCTTAGAAAAATCTGCAACAACCTTCTATTCTCCAACAAGACCCTTGACGCCAGTGGAGAACTCAGGCGCAAGAAGGTTCTAGAACTTTTCAATGACATACATGAGAGCATGTTAAAGAGTGAAGTTGTTGATATAGGGAGGCTGGTTTTTAAGACAACGATAAACTTGTTGTCGAACACTATTTACTCAGAGGATTTGATTCACTCTGTGGACAAAGCAGGGGAATTCAAGGAGGTGGTTGCGAATATTATGAGAGAGGTTGGGAGGCCGAATTTGGCAGATTTTTTCCCTGTGTTGAAAGTGATTGATCCACATGGGATCAGAAGGCGCACAGGTAGTTACTTCTGGAAGCTGTTGACCATCTTCAAAGGGTTGGTTGACCAAAGGGTGAAGCTGAGGAAACAGAGTGGTTACTGCACCAAAAATGACATGTTGGATGCTTTGCTTGAGAACGTTGATGCAGAGGGTAATGACACAGTTACAACTATGGTAGAATGGACAATGGCTGAGTTATTCCGTAACCCGGATGTCATGTCTAGAGCAAAAGCAGAGTTAGAACAAACTGTTGGTAAGTGCAACATGGTTGAAGAGTCGGACATTGGGAGACTTCCTTACTTAAATGCAATAGTGAAAGAGACTTTCCGGTTACACCCAGCAGGGCCACTTTTGCTCCCTCGTAAAGGCGAAGTGGATCTAGAGATAAATGGCTACATAGTCCCAAAGGGTGCAGAAGTGTTGGTTAATGTGTGGGCTATAGGGAGGGATCCCAATTTGTGGGTCAATCCGAATGTGTTTTCACCTGAGAGATTCTTGGGTTCAGAAATTGACTTTAAAGGTCGAAGTTTTGAGTTGATACCATTTGGTGCTGGGAGGAGAATATGTCCTGGCTTGCCATTAGCAATAAGGTTGTTGTTCTTGATGTTGGGTTTGCTTATCAATTGCTTTGATTGGGAGCTTGAAGGTGGAATCAAACCAAAAGATATGAATATGGAAGAAAAGTTTGGGCTTACCTTACAGAAGGCTCAACCTGTTCGAGTTGTTCCAATCAAAATAAAAAATTAA 2826 0.4505 MDTIFSFILLFLLTFTFFLRSLLSKRHKLPPGPHGLPIIGNLHQLGQKPHQTLARLAKIHGPIMSLKLGQVTTIVMSSSETAKQVLQIHDQFLSNRKIPDAMKGAGHDQYCLPFIPVSHRWRDLRKICNNLLFSNKTLDASGELRRKKVLELFNDIHESMLKSEVVDIGRLAFKTTINLLSNTVYSEDLIHSADKAGEFKEVVANIMKEVGTPNLADCFPVLKVADPHGIRGRTGSYFWKLLTIFKGLVDQRVKLRKQSGCCSKNDMLDAMLDNADAEEMYDLFVAGTDTVTSTVEWAMAELLHNPNVMSKAKAELEQTVGKGNLVEESDIGRLPYLNALVKETFRLHPAVPFLLPRKAEVDLEINGYMVSKGAQVLVNVWAIGRDPNLWDNPNVFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLMLGLLINCFDWELEGGIKPEDMNMEEKFGLTLEKDQPVRVVPIKANNDSLHSKRHKLPPGPRGLPIVGNLPQLGQQPHQTMASLAKIHGPIMSLKLGQVTTIVMSSSETAKQVLQIHDQFLPNRKIPDAVRAANHDQYCLPFLPISHRWRDLRKICNNLLFSNKTLDASGELRRKKVLELFNDIHESMLKSEVVDIGRLVFKTTINLLSNTIYSEDLIHSVDKAGEFKEVVANIMREVGRPNLADFFPVLKVIDPHGIRRRTGSYFWKLLTIFKGLVDQRVKLRKQSGYCTKNDMLDALLENVDAEGNDTVTTMVEWTMAELFRNPDVMSRAKAELEQTVGKCNMVEESDIGRLPYLNAIVKETFRLHPAGPLLLPRKGEVDLEINGYIVPKGAEVLVNVWAIGRDPNLWVNPNVFSPERFLGSEIDFKGRSFELIPFGAGRRICPGLPLAIRLLFLMLGLLINCFDWELEGGIKPKDMNMEEKFGLTLQKAQPVRVVPIKIKN. 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06216 941 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 481 - -
Seca9g06216 941 FunFam Cytochrome P450 76C4 22 478 - -
Seca9g06216 941 SUPERFAMILY Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS P450 superfamily signature 873 882 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS P450 superfamily signature 796 807 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS P450 superfamily signature 882 893 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Seca9g06216 941 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 Gene3D Cytochrome P450 483 939 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 Gene3D Cytochrome P450 18 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 875 884 IPR017972 GO:0005506|GO:0016705
Seca9g06216 941 FunFam Cytochrome P450 76C4 486 935 - -
Seca9g06216 941 SUPERFAMILY Cytochrome P450 495 937 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 CDD CYP76-like 522 936 - -
Seca9g06216 941 Pfam Cytochrome P450 495 927 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 Pfam Cytochrome P450 30 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06216 941 CDD CYP76-like 57 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06216 Seca-Chr9 178224276 178236441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06216 494 938 Cytochrome P450 AT2G45550 45.203 3.57e-144 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06216 - - eus:EUTSA_v10001282mg 775.393