Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06208 ATGATGCATCTCCTCCACATTCCATATCATTCCAACACCATGACCAAATCTATGATCAATAGTCTCAACCTCACCACCTCTTGCTACTCCTCCCACATGGTTGCAGCCACAGGGAACTTGTTTTCCCACAGCCTATTTCTCTTTCAACATATCCAAATCCTTGAGATCATAATTGCAGCCATGGTTTTCATGGCCATTAATTCTTTAAGGTCAAAGAAGCATCATGGCCTACCCATTTGGCCTGTCCTTGGAATGTTACCTTCCTTGGTCATAGGAATCAGAACCAACACATATGAATGGCTCACTGATGTTCTCAACAATCAAAATGGGACTTTTAGATACAAAGGGCCTTGGTTTTCTAGCCTCAATTGCATTGCCACCTCTGATCCTCGCAATGTGGAGCATCTTCTCAAGACAAAGTTCACTTTTTTCCCTAAAGGAAAGTTCTTTAGGGACACAACTTGTGATCTACTTGGAAATGGTATATTCAATGCAGATGATGAGACATGGCAGAGGCAGAGGAAGACAGCAAGCATTGAGTTTCATTCAACAAAGTTCAGGAAACTAACAACTGAGTCACTGTTTGAGCTTGTCCACAAGAGGCTCATACCTGTCTTAGAATCATCTGTTAAGAAATCTATTGCTATTGACCTTCAAGATGTGTTGTTAAGGCTCACTTTTGATAATGTTTGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTCACAACCACACTTGCCTGAAATAGAATTTGCCAAAGCCTTTGAGGATGCCACAGAAGCAACAGCAATTCGATTTGTCAGCCCTGTTTGTGTATGGAAGGCCATGAAGTTTCTCAACTTGGGAATGGAGAGAAAGCTGAAGAAATCAATAGAGAAAGTTGATGAATTTGCTGAGAATGTTATTAGGACAAGGAAGAAAGAGCTCTCTTTGCAACATGATGAGGAGGGGAATAATAAGGAGAAATTAGACTTGTTAACAGTGTTTATGAGGCTCAAGGATGAGAATGGAAAAGCATATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTCATATTAGCTGGGAGGGACACTTCTTCAGTTGCTTTGAGCTGGTTTTTCTGGTTGATTGATCAGAATCCTGAAGTGGAGGAAAAAATACTAGCAGAGATTTGCAGGGTGGTGAGTCAGAGGGAGGGAATCAAGAAGGAAGATTTTGAAAATTCATTGAGATTTAGGCCAGAGGAGATAAAGAAGATGGACTATTTGCATGCTGCTCTTTCAGAAGCTCTCAGATTATATCCTTCTGTGCCTGTGGATCACAAGGAGGTGGTGGAAGATGACATGTTCCCAGATGGAACTCTGCTAAAGAAGGGAACAAAAGTGATCTATGCAATTTATTCAATGGGAAGAATGGAAAGCATATGGGGAAAGGATTGCAGGGAGTTCAAGCCAGAAAGATGGCTAAGAGATGGCCATTTCATGAGTGAATCTGCTTACAAATTCACTGCATTCAATGGAGGACCTCGTTTTTGCTTAGGCAAAGATTTTGCATACTATCAGATGAAATATGCTGCAGCTAGCATCATATACCGTTACCATGTGAAGGTGGTAAAGGATCACCCTGTGGTGCCAAAGCTTGCTTTAACTCTCTACATGAAACATGGATTGAAAGTTAACCTTCATAGGCGTCATGTAGCAGAAATTCAAAAACACTTCAAGTTTAGTTAA 1713 0.4081 MMHLLHIPYHSNTMTKSMINSLNLTTSCYSSHMVAATGNLFSHSLFLFQHIQILEIIIAAMVFMAINSLRSKKHHGLPIWPVLGMLPSLVIGIRTNTYEWLTDVLNNQNGTFRYKGPWFSSLNCIATSDPRNVEHLLKTKFTFFPKGKFFRDTTCDLLGNGIFNADDETWQRQRKTASIEFHSTKFRKLTTESLFELVHKRLIPVLESSVKKSIAIDLQDVLLRLTFDNVCMIAFGVDPGCSQPHLPEIEFAKAFEDATEATAIRFVSPVCVWKAMKFLNLGMERKLKKSIEKVDEFAENVIRTRKKELSLQHDEEGNNKEKLDLLTVFMRLKDENGKAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNPEVEEKILAEICRVVSQREGIKKEDFENSLRFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDDMFPDGTLLKKGTKVIYAIYSMGRMESIWGKDCREFKPERWLRDGHFMSESAYKFTAFNGGPRFCLGKDFAYYQMKYAAASIIYRYHVKVVKDHPVVPKLALTLYMKHGLKVNLHRRHVAEIQKHFKFS. 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06208 570 Pfam Cytochrome P450 119 543 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PANTHER CYTOCHROME P450 63 553 - -
Seca9g06208 570 FunFam Cytochrome P450 68 561 - -
Seca9g06208 570 Gene3D Cytochrome P450 61 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS P450 superfamily signature 497 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS P450 superfamily signature 355 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS P450 superfamily signature 506 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 499 508 IPR017972 GO:0005506|GO:0016705
Seca9g06208 570 SUPERFAMILY Cytochrome P450 76 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 CDD CYP86A 112 551 - -
Seca9g06208 570 PRINTS E-class P450 group I signature 506 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS E-class P450 group I signature 496 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS E-class P450 group I signature 344 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS E-class P450 group I signature 418 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g06208 570 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06208 Seca-Chr9 178043040 178045940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06208 20 567 Cytochrome P450 AT5G23190 70.599 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06208 K15402 - gmx:100809503 885.56