Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06178 ATGTATGTACATAAACAGGGTTGTGATGGTTCTGTGTTACTTGCATCAACACCTGCTAACCCAATTGCTGAAAGAGACAACATTATCAACAACCCAAGCTTACGTGGCTTTGAGGTCATTGAAGAGGCCAAGACTCAATTAGAGGCTGCTTGTCCTCAAACTGTGTCATGTGCTGACATTCTAGCCTTTGCAGCTAGAGACAGTGCCCTTAAAGTTGGTGGCATAAACTATGATGTCCCATCAGGACGCAGAGATGGTCGTGTCTCAATTGGTGATGAAGTGCCACAAAATCTACCTGGACCAAGCTTGAAAGCTGATGAACTTATTAACAATTTTGCACAAAAGGGGTTATCAGCAGATGAAATGGTGACACTTTCAGGAGCACATTCAATTGGAGTATCACATTGTTCCTCCTTTTCTAAACGCCTTTACTCTTTCAATGACACAGTTACTCAAGATCCATCCATGGACCCTTCATTTGCTGCATCATTGAAAAACAAGTGTCCACCACCACCAAGCAACACAGACCCAACAGTGGATCTTGAAGGTGTCACTCCTATTCGTTTGGACAACAAGTACTATGATGGACTCATCAATCATCGTGGCTTGTTGACATCAGATCAAACGTTGTTAAGTAGCCAATCAACACAACAAATGGTGCTAAGTAATGCTAATTATGGTGCAAATTGGGCAACCAAGTTTGCGGAAGCAATGGTTCACATGGGTTCCATTGAGGTGCTCACTGGCTATGATGGCGAGATTAGGAAGCATTGCAGCTTTGATATATTGTGCTCATCTTCCCACTACCAATTATTAATAACAATGGATAGTACTACTCCACCACACATGCTTCAAATGATTTCTAGCTTGGTCATGATTCTATCTATATCTTCATTAGCATACTCAGCATCTCTTCAAGTGGGTTTTTATAGATCAACATGTCCATCTGCTGAGGCAATAGTGAGAATCACAGTAAACAAAGCGGTTGCTCTCAATCCTGGCATAGCTGCTGGTTTGATTAGAATGCATTTCCATGATTGCTTCGTTAGGGGTTGTGATGGTTCTGTGTTACTTGCATCCACACCTGGTAACCCAATTGCTGAAAGAGACAACTTCATCAACAACCCAAGCTTACGTGGCTTTGAGGTCATTGAAGAGGCCAAGACTCAATTAGAAGCTGCATGTCCTCAAACTGTGTCATGTGCTGACATTCTAGCCTTTGCAGCTAGAGACAGTGCCCTCAAAGTTGGTGGCATAAACTATGATGTACCCTCAGGACGCAGAGATGGTCGTGTCTCAATTGGTGATGAAGTGCCACAAAATCTACCTGGACCAGACTTCAATGCTGATGCACTTATTAACAATTTTGCAACAAAAGGGTTATCAGCAGATGAAATGGTGACACTTTCAGGAGCACATTCAATTGGAGTATCACATTGTTCTTCCTTCTCTAAGCGCCTGATTACACAAGATCCATCTATGGACCCTTCATTTGCTGCATCATTGAAAACCAAGTGTCCACCACCACCAAGCAACACAAACCCAATAGTGGATCTTGATGTTATTACTCCTAATCGTTTGGACAACAAGTACTATGAGGGATTGGTCAACCATCGTGGCTTGTTGACCTCAGATCAAACATTGTTAAGTAGCCAATCAACACAACAAATGGTGTTAAGCAATGCTAATTATGGTTCAAATTGGGCAACCAAGTTTGCAGAAGCAATGGTTCACATGGGTTCTATAGATGTGCTAACTGGCTATGATGGTGAGATCAGGAAGCATTGCAGCTTTGTTAATTAA 1803 0.4221 MYVHKQGCDGSVLLASTPANPIAERDNIINNPSLRGFEVIEEAKTQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIGDEVPQNLPGPSLKADELINNFAQKGLSADEMVTLSGAHSIGVSHCSSFSKRLYSFNDTVTQDPSMDPSFAASLKNKCPPPPSNTDPTVDLEGVTPIRLDNKYYDGLINHRGLLTSDQTLLSSQSTQQMVLSNANYGANWATKFAEAMVHMGSIEVLTGYDGEIRKHCSFDILCSSSHYQLLITMDSTTPPHMLQMISSLVMILSISSLAYSASLQVGFYRSTCPSAEAIVRITVNKAVALNPGIAAGLIRMHFHDCFVRGCDGSVLLASTPGNPIAERDNFINNPSLRGFEVIEEAKTQLEAACPQTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIGDEVPQNLPGPDFNADALINNFATKGLSADEMVTLSGAHSIGVSHCSSFSKRLITQDPSMDPSFAASLKTKCPPPPSNTNPIVDLDVITPNRLDNKYYEGLVNHRGLLTSDQTLLSSQSTQQMVLSNANYGSNWATKFAEAMVHMGSIDVLTGYDGEIRKHCSFVN. 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06178 600 Gene3D - 308 600 - -
Seca9g06178 600 Gene3D - 6 260 - -
Seca9g06178 600 ProSitePatterns Peroxidases proximal heme-ligand signature. 465 475 IPR019793 -
Seca9g06178 600 ProSitePatterns Peroxidases active site signature. 336 347 IPR019794 GO:0004601
Seca9g06178 600 FunFam Peroxidase 443 579 - -
Seca9g06178 600 CDD secretory_peroxidase 6 260 IPR033905 GO:0004601|GO:0042744
Seca9g06178 600 FunFam Peroxidase 6 106 - -
Seca9g06178 600 Gene3D Peroxidase, domain 2 443 579 - -
Seca9g06178 600 Gene3D Peroxidase, domain 2 99 241 - -
Seca9g06178 600 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Seca9g06178 600 PRINTS Plant peroxidase signature 518 533 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 534 551 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 417 432 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 379 392 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 338 358 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 574 587 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 314 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 398 408 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Plant peroxidase signature 464 476 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 ProSiteProfiles Plant heme peroxidase family profile. 6 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 CDD secretory_peroxidase 305 599 IPR033905 GO:0004601|GO:0042744
Seca9g06178 600 ProSiteProfiles Plant heme peroxidase family profile. 304 600 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 SUPERFAMILY Heme-dependent peroxidases 305 600 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 Pfam Peroxidase 323 562 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 Pfam Peroxidase 6 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 FunFam Peroxidase 99 241 - -
Seca9g06178 600 SUPERFAMILY Heme-dependent peroxidases 6 260 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 FunFam Peroxidase 308 449 - -
Seca9g06178 600 PRINTS Haem peroxidase superfamily signature 417 429 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Haem peroxidase superfamily signature 465 480 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Haem peroxidase superfamily signature 336 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Haem peroxidase superfamily signature 399 416 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PRINTS Haem peroxidase superfamily signature 520 535 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g06178 600 PANTHER PEROXIDASE 25-RELATED 294 593 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06178 Seca-Chr9 177414909 177423142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06178 289 600 Peroxidase AT4G11290 45.062 7.73e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06178 K00430 - gmx:100786791 484.952