Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06157 ATGTTTTGGAAGGAGAATAATGGTAATGGCTACCAGCAGCAGCCACCGGGACCGGGAATGGGGTACAGCCAGAGCCACAGACACCGAGAGCGAGTCCGTCGTGGCACTCGCAGGTCACGTGCTTCCCCTTCCTCTTCTTCTTCTACTTCCCTTAGGGTTTGTGATAGCGAGCAAAATCATCGACCCCCTTGCACGGATTACGACATGGCCTATTTCCATTCCTACGCTCACCTTGGTATCCACCAAGAGATGATCAAGGATCGTGTGCGCACTGAAACTTATAGGGAAGCAATAATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTAGTTGATGTAGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTATATGCAGTTGATGCTAGTGACATTGCCCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTGTCTGATGTTGTTGTTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGGTGCTTGTTAGATTCTTCTGGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGCGGTCTTATACTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACTGACAGATACAGTGATAGCATCGACTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAGGAACCTTCTGTGGAGACCATAAATGGTGAAAATGTTTTGACATGGCCACATGTGGTTAAATATGTTGATTGTTATTCTGTCACCATCCAAGAGTTGGAAACTGTAACAACAAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTACATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGGGCCTACAATAGCACCAACCAATTATCATTCGTCAACATCATTTAATGAGAATCATCAGGTGAATGGCAGTCAGAGAAAAAAGCGAACAAATCCAAATGAAGCACTGGTACTGTCCACTGCACCTGAGGATCCTCCAACACATTGGCAGCAGACATTGATATACTTCTATGATCCTATAGAGCTGGTACAAGATCAACTAATTGAAGGTTCAGTTACACTGTCACAGAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGTTTGTGAAAGAGTCTGTTATGAGATGA 1281 0.4317 MFWKENNGNGYQQQPPGPGMGYSQSHRHRERVRRGTRRSRASPSSSSSTSLRVCDSEQNHRPPCTDYDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYEVLVRFFWSMLGSVITARDRWLKPGGLILPSSATLYMAPVTHTDRYSDSIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETINGENVLTWPHVVKYVDCYSVTIQELETVTTKFKFNSMMRAPLHGFAFWFDVEFNGPTIAPTNYHSSTSFNENHQVNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELVQDQLIEGSVTLSQSKENARFMNIHLEYTSGGRSFVKESVMR. 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06157 426 Gene3D - 219 424 - -
Seca9g06157 426 MobiDBLite consensus disorder prediction 1 20 - -
Seca9g06157 426 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 68 409 IPR025799 GO:0016274|GO:0018216
Seca9g06157 426 MobiDBLite consensus disorder prediction 1 59 - -
Seca9g06157 426 Pfam Ribosomal protein L11 methyltransferase (PrmA) 106 179 - -
Seca9g06157 426 MobiDBLite consensus disorder prediction 39 56 - -
Seca9g06157 426 FunFam Protein arginine N-methyltransferase 6 219 424 - -
Seca9g06157 426 FunFam Protein arginine N-methyltransferase 6 64 217 - -
Seca9g06157 426 CDD AdoMet_MTases 110 216 - -
Seca9g06157 426 Gene3D Vaccinia Virus protein VP39 65 217 IPR029063 -
Seca9g06157 426 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 416 IPR029063 -
Seca9g06157 426 MobiDBLite consensus disorder prediction 332 352 - -
Seca9g06157 426 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 43 414 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06157 Seca-Chr9 176849756 176867520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06157 52 393 C2H2 Transcription Factor Family AT3G12270 36.695 1.10e-63 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06157 K11437 - gmx:100809174 676.781