Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06156 ATGCAGCCTAAGCCTATCCCTTTGGGAATCTCAACCACCACTAAAATCTCACCTTTCAATATTACTTCTACCAAACCAATCTCTTTCCCATCCAAAATTTCACCTTCCTCTAATGAATTCTCCGTCCTTTCTCTCTCCCTGTCAGGATTTTGCAGGGCCAGTCAATTTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTCCGTGAGGCAAGATTAGAGGACTACTGGCAAGTGGCAGAGACTCACTGCAACACCTTCTTCCCGGAATATTCCTTCCCATTAGATTTTATGCTGAGGATTGACAGATTGGTGGTGGCTATGTTAGCAGCTATGTTAGCAAGATTGGCTAGGCCAAGAGGTTGCAGAAGAATCTGTTTGGTGGCTGTTGCTAGCAGCTCACTTGATGAAACCTTTCTGTTTCGAAATGGAGATCTTAAGATTGGTGGTTTTGATGGGAAATTTAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAATAGACAATATTGCAGACTTTCTACCAAGAAAGGGACCAATGCGACGGAGAAGGACTGGAATTGCATACATATCCAATGTGGCAGTGCGGGAAAATTTTCGGAGGAAAGGAATAGCTAAAAAATTGATAGCAAAGGCGGAATCCAAGGCCAGAAGTTGGGGATGTCGTGCTATTGCATTGCATTGTGATCTGAACAACTCAATGGCCACAATGTTATACCGAGGCCAAGGTTTCAAATGTATCAAGGTGCCAGAAGGAGCAAAGTGGCCTCAGCCAAAGAGCTCGTCGGATATCAGGTTCAACTTCATGATGAAACTTCTCTAA 828 0.4348 MQPKPIPLGISTTTKISPFNITSTKPISFPSKISPSSNEFSVLSLSLSGFCRASQFVDLFPTVSPEIIVREARLEDYWQVAETHCNTFFPEYSFPLDFMLRIDRLVVAMLAAMLARLARPRGCRRICLVAVASSSLDETFLFRNGDLKIGGFDGKFSLNKGYVAGILTIDNIADFLPRKGPMRRRRTGIAYISNVAVRENFRRKGIAKKLIAKAESKARSWGCRAIALHCDLNNSMATMLYRGQGFKCIKVPEGAKWPQPKSSSDIRFNFMMKLL. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06156 275 Gene3D - 62 257 - -
Seca9g06156 275 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 113 275 IPR000182 GO:0016747
Seca9g06156 275 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 275 - -
Seca9g06156 275 Pfam Acetyltransferase (GNAT) family 161 246 IPR000182 GO:0016747
Seca9g06156 275 CDD NAT_SF 182 229 - -
Seca9g06156 275 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 260 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06156 Seca-Chr9 176840532 176843581 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca9g06156 Acetyltransf_1 5.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06156 - - gmx:100803930 425.246