Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06151 ATGGAAGAAGTGGGTGATGAATACTTTGATGAATTAGTATCTCGGTCACTAATACGTCGACAGACTGTCAATGACAAAGAAAGCTTTACGATGCATGACCTCATCAATGAATTAGCCACAATTGTTTCATCTGCATATTGTATGAGGAATAAGGATCCAAAGCCACATGAAAGTCTTGAAAGAGCTCGTCATTTGTCATACAACAGAGGGAAGTATGACTGCTTCAATAAATTTAATACATTTTATGGATCAATGTGTCTTCGTACTTTTCTAGCCTTACCAATAAGACATTGGTGGTCATCAAAATATCCTAATTTGAGAAGCCATTACCTATCTAGCAAGTTATTATTTGACTTGTTGCCAGCAATGAGACGGTTGAGGGTGTTATCTTTGTCACACTATAATAATATCACTGAGTTGCCTAACTCTCTCGGAAATTTAATACATCTGCGATACTTAGATCTCTCTAACACTAAAATTGAAAGATTGCCAGATGTAATATGCAAGCTCTACAATCTGCAGACCCTGTTGTTGTCCAAATGTTGCTCACTCACTGAATTACCTGAGGACATTGGAAATTTGGTTAATCTACGCCACCTTGATGTCAGTGATACTAAATTGAAGGAGATGCCTATACAAATAGCCAAACTTCAAAATCTTCAAACTCTGTCCACCTTTGTTGTCAGCAAACAGCAAGATGGATTGAAGGTTGCAGAGATGAGAAAATTCCCCCATTTACAAGGGAAACTTTCAATCTTAAAGTTACAAAATGTTACTGATCCGTCTGATGCCTTTCAAGCCAACTTGAAGAAGAAAGAACAAATTGATGAGTTGACATTAGAATGGGATTGCAATGCTACTGAAGACTCACAAATGGAAAGGCTTGTACTTGAACAGCTGCAGCCCTCAACAAATTTGAAGAAACTCACCATTCATTTCTATGGTGGAACCACCTTTCCAAACTGGTTAGGAGATCCCTCATTTGGCAACATGACGAGTTTGCGCATCAGTGGCTGTGATCATTTTGGTTCTGAATTCTATGGAAGTAGTTCCCCTTCTTTTCATCCATTTCCCTCCTTGGAGATTCTGAGCTTTGAGGAGATGCCAGAGTGGGAGGAATGGGAGTTGATTGGAGGTACGGCTATAGAATTTCCTAGTCTAAGGCGTTTGTTTCTATGTGATTGTCCCAAACTCAAAGGAAACATACCAAAAAACCTTCCTTCCTTAGTTGAACTTGAGTTGTCCCAATGTCCTCTACTTGAGTCACAGCATCCATATGAGGTGGATAACAGCAACATTGGAAGGCCATCACATCTTGGGTGGATGATGCTTGGCCTTAATTCTCTTAGAGAGTTGACTATATCTGGCATTCCCTCTCTGACATACTTCCCAATAGATGTTCTGCCCACAACATTACAATCTCTTACTTTCCTTTCTTGTGAGAATCTGAAATCTTTACCTCATGAATCCTTGCCGAGTTACACGTCACTTGAGAAATTGCAAATATTCAATAGCTGTGATTCAATGACATCCTTTCAGTTAGGCTGTCTTCCTGTACTCAAAAGTCTCTTCATCTTGGGTTGTAAAAATCTGAAATCTATTTCTGTTGCAGAAGATGCATCCCAAAGTCTCTCTTTTCTTCAAAGTTTATCCATATATGCTTGTCCTAATCTGGAGTCATTTCCACTAGGTGGACTGGCCACTCCTAACCTCAACCATTTCTCGGTGTCAAGTTGTCGTAAGCTTAAGTCACTACCAGAACCAATTAACACCCTATCTGGCCTTTATCAATTGAGTATTTATGGGCTTCCAAATCTGCAGACTTTTGCACAAGACAGTTTACCTGTGAATTTAAGGATACTTGAAGTTTCCAAATGTGGGAGTTTGTCTGCTACAGCTATCACTAAGTGGGGTTTGCAATGGCTTACTTGTCTTGCAGAGTTGCGAATTCGAGGTGATGGTCTTGTGGATGCACTGATGAAAATGGAAGTGTCTTTGCTTCCCACTTCTCTTGTGTCCCTACGCATCTCTCATCTTTACTACATAAAATGCTTGGAAGGGAAGTGGCTTCAGCATCTCACCTCTCTTGAAAACCTTGAGATTTCAGATTGTCGCCGACTTGAATCCTTACCAGAAGAGGGACCGCCTTCCTCTCTTTCAGTACTGAGTCACTGA 2175 0.4028 MEEVGDEYFDELVSRSLIRRQTVNDKESFTMHDLINELATIVSSAYCMRNKDPKPHESLERARHLSYNRGKYDCFNKFNTFYGSMCLRTFLALPIRHWWSSKYPNLRSHYLSSKLLFDLLPAMRRLRVLSLSHYNNITELPNSLGNLIHLRYLDLSNTKIERLPDVICKLYNLQTLLLSKCCSLTELPEDIGNLVNLRHLDVSDTKLKEMPIQIAKLQNLQTLSTFVVSKQQDGLKVAEMRKFPHLQGKLSILKLQNVTDPSDAFQANLKKKEQIDELTLEWDCNATEDSQMERLVLEQLQPSTNLKKLTIHFYGGTTFPNWLGDPSFGNMTSLRISGCDHFGSEFYGSSSPSFHPFPSLEILSFEEMPEWEEWELIGGTAIEFPSLRRLFLCDCPKLKGNIPKNLPSLVELELSQCPLLESQHPYEVDNSNIGRPSHLGWMMLGLNSLRELTISGIPSLTYFPIDVLPTTLQSLTFLSCENLKSLPHESLPSYTSLEKLQIFNSCDSMTSFQLGCLPVLKSLFILGCKNLKSISVAEDASQSLSFLQSLSIYACPNLESFPLGGLATPNLNHFSVSSCRKLKSLPEPINTLSGLYQLSIYGLPNLQTFAQDSLPVNLRILEVSKCGSLSATAITKWGLQWLTCLAELRIRGDGLVDALMKMEVSLLPTSLVSLRISHLYYIKCLEGKWLQHLTSLENLEISDCRRLESLPEEGPPSSLSVLSH. 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06151 724 Gene3D Ribonuclease Inhibitor 610 724 IPR032675 -
Seca9g06151 724 ProSiteProfiles Leucine-rich repeat profile. 149 170 IPR001611 GO:0005515
Seca9g06151 724 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 543 720 - -
Seca9g06151 724 Gene3D Ribonuclease Inhibitor 71 239 IPR032675 -
Seca9g06151 724 Gene3D Ribonuclease Inhibitor 240 429 IPR032675 -
Seca9g06151 724 Gene3D Ribonuclease Inhibitor 430 609 IPR032675 -
Seca9g06151 724 Pfam Leucine Rich repeats (2 copies) 125 165 IPR025875 -
Seca9g06151 724 ProSiteProfiles Leucine-rich repeat profile. 125 147 IPR001611 GO:0005515
Seca9g06151 724 SUPERFAMILY L domain-like 445 722 - -
Seca9g06151 724 SMART LRR_typ_2 147 170 IPR003591 -
Seca9g06151 724 SMART LRR_typ_2 123 146 IPR003591 -
Seca9g06151 724 SMART LRR_typ_2 194 217 IPR003591 -
Seca9g06151 724 SUPERFAMILY L domain-like 89 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06151 Seca-Chr9 176749610 176751862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06151 137 231 WRKY Transcription Factor Family AT4G12020 42.708 3.17e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06151 - - mtr:25480434 1058.13