Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06132 ATGGAGCATGATGAAAATCAGTCACTTGAATTTGATGAGCCTAAAGACATTTTTCTTGGTCAAGTTGTGCATAGCCAAGATGAAGCTTATAACTTATACCAAGCACATGCCTTCAAAATGGGGTTTAGTGTAAGAAAGGGGAAGGAGTTGTATTATGATAGTGAGAAAAAGAAAGAAGGGTTTAAAAATAATGAAGCTGAAGATGAAGTGGCTTATGAAAGATCAAATTCAAGAATGAGTTGTAAAGCAATGGTGCGATTTAATGTGAGTAAGGAAGGAGTTTGGAAAATTACACAGTTGGTACTCAATCACAATCACGAGTTTGTGCCACCAGAGCAAAGACACTTGTTACGTTCTATGAGAAATGTATCTACTATCAAAGGGGGCATGATAAAGTCCATGGTGAATGCCAGTATAAAAAGTTACAAAGATTTGGAGTTATTTAGGAGAGGAAGTTGGTGGATTCGATAA 471 0.3652 MEHDENQSLEFDEPKDIFLGQVVHSQDEAYNLYQAHAFKMGFSVRKGKELYYDSEKKKEGFKNNEAEDEVAYERSNSRMSCKAMVRFNVSKEGVWKITQLVLNHNHEFVPPEQRHLLRSMRNVSTIKGGMIKSMVNASIKSYKDLELFRRGSWWIR. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06132 156 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 140 - -
Seca9g06132 156 Pfam FAR1 DNA-binding domain 32 110 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06132 Seca-Chr9 176373068 176373567 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g06132 FAR1 3.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06132 - - tpra:123905334 203.371