Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06119 ATGTTAAAGCGCTCCGGCCGCCAATCGCCGGCGGCACCGGCACCGGAGTCGTTCGCCGACAAGATCTACCAGTTCCGTGGTGCCTTTCTGATGGTGGCGCTCCCTCTCCTCCTCGTCACGCTCATTCTCTACCTCATGCCTTCCACCTCTTCCAACGAGTCCATCGAGGATTACGCCCTCACGCACCGCAAGATGTCCCCCGATCGCAAAAGCTCCGATTCCTTCGCCGTCATCTTCGACGCCGGTAGCTCCGGCAGCCGCGTCCACGTATTCCGTTTCGACTACAACCTAGATCTCGTTCACATTGGCAAAGATCTCGAGCTTTTCGTGCAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACGACAGGCAGCGGAATCTCTGATTACTCTTTTGGATAAAGCGGAAAGTGTTGTTCCTAGGGAGTTTCGCCCCATGACACCCGTTAGAGTTGGGGCAACGGCGGGTTTGAGGGCATTGGAAGGGGATGCTTCTGATAGGATCTTGCAAGCGGTCCGGGATTTGCTTAAGGAAAGAAGCACCCTGAAATATGAGCCTGACGCGGTTACTGTGCTGGATGGAACCCAAGAAGGTGCTTTTCAGTGGGTGACTATTAACTATCTACTGGGAAACTTAGGAAAAGATTATTCAGAGACTGTTGGTGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAAACAGGTGCTGCCAAGGCTCCAAAAGTACCGGATAGAGAGGATCCATATGTCAAGGAGATGTTCCTAAGAGGCAGGAAATATTACCTCTATGTTCACAGTTACTTGCGCTATGGTTTGCTAGCAGCTCGTGCAGAGATTTTAAAGGTTTCTGATGATTCTGGAAACCCTTGCATCTTAGCTGGCTTTAATGGATCTTATAATTATGGAGGAAAGTCATTTAAGGCCTCATCCTCCCCTGCTAGCTCAAGCTTGAAAGATTGCAAAAGCATAGCTCAGAAGGCTCTCAAGGTTAACGAGTCAACGTGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGCGGCGGGGATGGACAGAAAAACCTCTTCGTTGCCTCATTTTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAATTTACCGGTTGTGAAAGTTCGTCCTGTGGATTTTGAGGATGCAGCTAAGAAAGCTTGTCAAACAAAACTCGAGGATGCCAAATCCACCTACCAACGTGTTGAGGAGGGGAACCTTCCATATTTATGCATGGATCTTGTATACCAATATACATTGCTCGTTGTTGGATTCGGCCTAGATCCATTGCAACATATTACATTAGTTAAGAAAGTTCAATATCATGATGCTCTTGTTGAAGCTGCATGGCCCCTAGGCAGCGCCATAGAAGCGGTATCATCTGCATAA 1431 0.4836 MLKRSGRQSPAAPAPESFADKIYQFRGAFLMVALPLLLVTLILYLMPSTSSNESIEDYALTHRKMSPDRKSSDSFAVIFDAGSSGSRVHVFRFDYNLDLVHIGKDLELFVQIKPGLSAYAQNPRQAAESLITLLDKAESVVPREFRPMTPVRVGATAGLRALEGDASDRILQAVRDLLKERSTLKYEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSETVGVVDLGGGSVQMAYAISETGAAKAPKVPDREDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEILKVSDDSGNPCILAGFNGSYNYGGKSFKASSSPASSSLKDCKSIAQKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVVKVRPVDFEDAAKKACQTKLEDAKSTYQRVEEGNLPYLCMDLVYQYTLLVVGFGLDPLQHITLVKKVQYHDALVEAAWPLGSAIEAVSSA. 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06119 476 CDD NBD_sugar-kinase_HSP70_actin 77 236 - -
Seca9g06119 476 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 19 475 IPR000407 GO:0016787
Seca9g06119 476 Gene3D Exopolyphosphatase. Domain 2 195 454 - -
Seca9g06119 476 Gene3D - 75 470 - -
Seca9g06119 476 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 194 209 IPR000407 GO:0016787
Seca9g06119 476 FunFam Apyrase 1 195 454 - -
Seca9g06119 476 Pfam GDA1/CD39 (nucleoside phosphatase) family 70 474 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06119 Seca-Chr9 176034275 176040199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06119 16 475 Calmodulin-binding Proteins AT3G04080 68.478 0.0 617