Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06082 ATGTTCGCTTCTCGTCATTGTGTCGGTATCTCAGTGCTAAGTTGTCCAGGTTCTGTTTATAATGTTACCCTTTGTCATCAGCTTTCTGGTATTGCTCCTCCTTTGTCTTTTACAAGAGATTTCAACATTATATCTCTCATGGGATCACAGAGTAAAGTATTTGGTGGGGTTGTTGGAGGAAAGGTTGTGGTTGTATGCCATGTGGTTTTTGTGGGTTCAATGTTCAAGAAGCTTGAGCACCACAAGGTACGCATCATCAATGGAAGACTAATTGAAGAGGGTGACCTCACATATGTGCCTACCATTAATGTTGATGCAAGCAACCTTAGTGGTATCTTAGTGCTAAGTTGTCCAGGTTCTGTCTCTAATGTTACCCTTTGTCATCCTCTTTCTGATGTTGCTCCTCCTTTGTCTTTTACTGGAGATTTCAACATTATATCTCTCGTAGGATCACAGAGCAAAGTATTTGGTGGGGTTGTTAGAGGAAAGGTTGTGGCTGCAGGTCGTGTGGTTATTGTGGGTTCAATATTCAAGAAGCTTGTGCACCACAAGGTCGCATTATCAATGGAAGACTGA 576 0.4201 MFASRHCVGISVLSCPGSVYNVTLCHQLSGIAPPLSFTRDFNIISLMGSQSKVFGGVVGGKVVVVCHVVFVGSMFKKLEHHKVRIINGRLIEEGDLTYVPTINVDASNLSGILVLSCPGSVSNVTLCHPLSDVAPPLSFTGDFNIISLVGSQSKVFGGVVRGKVVAAGRVVIVGSIFKKLVHHKVALSMED. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06082 191 SUPERFAMILY AF0104/ALDC/Ptd012-like 4 74 - -
Seca9g06082 191 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 110 189 IPR014476 GO:0003680
Seca9g06082 191 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06082 Seca-Chr9 175499164 175501235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06082 111 191 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 34.259 8.01e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06082 - - pop:7463887 50.447