Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06051 ATGGATACCCCACTCCTCCATTCTCTGATTCCGAGCTACCTTTACTCTTCATCATCCTCTTTGAATTTGATGATTGGTGCTCCGAGTGAGCGTGGGTATAATATCAAGATGTACTCACCAGCACACTATGCTGCTTGTGCCGTTGGTGGAAGCCTCTGTTGTGGACTCACTCACATGGCTGTTACACCTCTTGACCTTGTCAAATGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCACCTCCTCTGCATTTGGAGTTATGCTTAAGGAGCAAGGCTTCAGGGGCTTTTTCAGAGGATGGGTACCTACCTTTCTCGGTTATAGTGCACAGGGTGCTTGCAAATATGGGCTCTATGAGGTCTTCAAGAAGCACTATTCTGATATTGTTGGCCCTGAGTATGCAACCAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCAGATGTTGCACTTTGCCCATTTGAGGCCGTGAAGGTCAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGCCTTGCTGATGGGCTACCAAAATTGGTCAAATCTGAAGGAGTCTCAGGGCTATACAAGGGAATTGTGCCTCTGTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTTTGAGAACATTGTTGAGATGATCTATAAACATGCCATCCCCACAGCAAAAGAGGATTGCAGCAAAACCCAACAACTAGGTGTGAGTTTTGTTGGTGGATACATAGCTGGTATATTATGTGCAGTTGTGTCTCATCCTGCTGATAACCTTGTCTCTTTCCTGAACAATGCCAAAGGGGCAACGGTTGGTGATGCTGTAAAGAACCTTGGATTATGGGGTCTATTTACCCGTGGTCTCCCTCTGCGTGTTCTGATGATTGGAACTCTCACTGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGGGTTACTCCTGCTGCTGTTTCTGTTCCTGTTCCAGCCCCTGCTTCTGCTACTTAG 1032 0.4641 MDTPLLHSLIPSYLYSSSSSLNLMIGAPSERGYNIKMYSPAHYAACAVGGSLCCGLTHMAVTPLDLVKCNMQIDPAKYKSTSSAFGVMLKEQGFRGFFRGWVPTFLGYSAQGACKYGLYEVFKKHYSDIVGPEYATKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVKSEGVSGLYKGIVPLWGRQVPYTMMKFASFENIVEMIYKHAIPTAKEDCSKTQQLGVSFVGGYIAGILCAVVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRVLMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPAAVSVPVPAPASAT. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06051 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 318 IPR018108 -
Seca9g06051 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 125 IPR018108 -
Seca9g06051 343 Pfam Mitochondrial carrier protein 42 127 IPR018108 -
Seca9g06051 343 Pfam Mitochondrial carrier protein 141 226 IPR018108 -
Seca9g06051 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 222 IPR018108 -
Seca9g06051 343 Gene3D Mitochondrial carrier domain 41 319 IPR023395 -
Seca9g06051 343 FunFam Phosphate carrier protein, mitochondrial 41 319 - -
Seca9g06051 343 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 30 329 IPR044677 GO:0005315|GO:1990547
Seca9g06051 343 SUPERFAMILY Mitochondrial carrier 42 314 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06051 Seca-Chr9 175113130 175116767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06051 19 330 Chloroplast and Mitochondria Gene Families AT5G14040 79.167 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06051 K15102 - twl:119993760 547.74