Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06045 ATGGAGAAGAACCTTTCTGAGAATTCTGGCAGTTTTGCTGGCAAAGACGAGGACACCATTACCGGAGACACCCCTAGTTTGCCATTGTTGGAACCTGTAAACAATGTTGATGGCGAAACTGAAAAAGATGTGGATGCAAATCATCATGTCCAGGGAGAGCCGGAGGAAGCAGTTGTAGAGGTTCCACCAGAAACTCCTCCTCCCAACCTGGAAAAGGTTTCAGAAGACATCGATCGTTTCCTTGTGACTTCACAAGTTAATCATGACAACGCAGATGCCAAGGAAGTCCTGTTAGAGATCCCAGATTTCATGAACAGGTTCTTGGATCTCGTTGAAGAGAAGATCATGAGGTACGACACAGGGGAAGCCAAGTGGGGTGATGTTGCGGAGGAAGATTCCTCATTGTTGGAAGCCGTGAATCGAATTTCAAAGCTGGTGAATTTCATGAGCACAGAGTCACAATCACCCCAAGAAGAAGAAAAAAAAGAAGAGGAAGAAGAAAAACAAGAGATCAATGGGAAAAAGGACTTGTTTGTCAATCGCATTGGTGGTATTCAACATCGTGCAATGTCGTATTTGGAGGAAGAGTTCCGAATATTGATGGAAGAATCTAGAAACCACAACAAATCAGAACCTGACCCAAAAGGGAAGCATGTGGCTACAGAATCGTTGGACTCCGAACTCACAGAGATGGTGACAGATTTCCCGGGTTTTTCGGAGGACGTCGTTACAAATCTGAACAAGATAGCGCGGGAGATGATATTTAGCGGTTTTGAATCAGAGTGTTGCCATGTCTACGCGGTTTCAAGGAGGCATGCATTTGAGAACAGCTTACACAAGTTGGGCTACGAGAAGATCAGCATCGATGAGGTTCAGAAAATGCAATGGGAGTCCTTAGAGAGAGAGATCCCAACGTGGATCAACACCTTCAAGGAATGCACTGCTATGTGGTTCCCTGGCGAGAAGAAGCTAGCAGAGTTAGTCTTCTCAGAGAACCCGCTTGTGGCAGCGAGTCTCTATGGTAGCCTCATTCGCATTGTTGCGATACAACTCCTTAACTTCGCAGAGAGTGTGTCAATGACGAGGCGCGCTGGGGAGAAGCTTTTCAAGCTATTGGACATGTACGAGACCTTGAGGGACGCTATCCCGAATATGGAGAATATGTTCCCTGAGGAGTACGTTAGTGAAATCAAAGCCGAAACAAGTTCAGCAAAGTGTAGACTCGGCGAGGCTGCGGTGCTCATATTTTGTGAGCTCGAAAACTCGATCAAATCTGAGACTGGGAAAACGCCAGTCGCTGGTGGGGCGGTTCACCCATTAACACGCTACATCATGAACTACCTAAGGTTGGCATGTGAATACAAGGACACGTTGGAGGAGGTGTTTAGGGAGCACTCAAAGATTGAGCGTGCGGACTCCACTAGTAGACCTCATTACGAAGGGGACCAACAAAGGTCGACAGAAAAGGAAAACGCATCACCGTTTGCAACACAATTGATGAGGGTCATGGGGTTGCTGGACTCGAACCTTGAAGGGAAGGCAAAGCTGTATAGAGACACGGCATTGAGTTGCATCTTCATGATGAACAATGGGAGGTACATTGTTCAAAAAATCAAAGGCTCCACGGAGATTTATGAGGTTATGGGTGAGACATGGTGTAGGAAGAGATCCACTGAGTTGAGAACCTACCACAAGAATTACCAAGTAGAAACATGGAGCAAGATAGTTAGTTCCCTTAGCCCCAAAGGGGTGAGCGATCATGGGAAGCTGCATAAACCGGTGCTGAAAGAGAGGTTCAAGAGCTTCAATGCTTTATTTGAGGAGATACACAAGACGCAAAGCACGTGGGTGGTGAGTGACGAACAACTTCAATCGGAGCTAAGAGTTTCTATTTCAACGTTGGTCATACCCGCATACAGGTCATTCTTGGGGAGGTTTTCACAATATTTGGATCCAGGGAGACAAACAGAGAAGTACATTAAGTTCCAGGCAGAGGATGTGGAGACTTACATCAATGAGTTGTTTGATGGGAACCCTCACCATCCGGGAAATGCTAGAAAGAAAGCATGA 2070 0.4628 MEKNLSENSGSFAGKDEDTITGDTPSLPLLEPVNNVDGETEKDVDANHHVQGEPEEAVVEVPPETPPPNLEKVSEDIDRFLVTSQVNHDNADAKEVLLEIPDFMNRFLDLVEEKIMRYDTGEAKWGDVAEEDSSLLEAVNRISKLVNFMSTESQSPQEEEKKEEEEEKQEINGKKDLFVNRIGGIQHRAMSYLEEEFRILMEESRNHNKSEPDPKGKHVATESLDSELTEMVTDFPGFSEDVVTNLNKIAREMIFSGFESECCHVYAVSRRHAFENSLHKLGYEKISIDEVQKMQWESLEREIPTWINTFKECTAMWFPGEKKLAELVFSENPLVAASLYGSLIRIVAIQLLNFAESVSMTRRAGEKLFKLLDMYETLRDAIPNMENMFPEEYVSEIKAETSSAKCRLGEAAVLIFCELENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFREHSKIERADSTSRPHYEGDQQRSTEKENASPFATQLMRVMGLLDSNLEGKAKLYRDTALSCIFMMNNGRYIVQKIKGSTEIYEVMGETWCRKRSTELRTYHKNYQVETWSKIVSSLSPKGVSDHGKLHKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISTLVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDVETYINELFDGNPHHPGNARKKA. 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06045 689 Gene3D Exocyst complex component Exo70 122 683 - -
Seca9g06045 689 MobiDBLite consensus disorder prediction 1 15 - -
Seca9g06045 689 MobiDBLite consensus disorder prediction 155 172 - -
Seca9g06045 689 PANTHER EXOCYST COMPLEX PROTEIN EXO70 108 677 IPR004140 GO:0000145|GO:0006887
Seca9g06045 689 MobiDBLite consensus disorder prediction 149 172 - -
Seca9g06045 689 MobiDBLite consensus disorder prediction 1 70 - -
Seca9g06045 689 Pfam Exo70 exocyst complex subunit 306 673 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca9g06045 689 MobiDBLite consensus disorder prediction 469 487 - -
Seca9g06045 689 SUPERFAMILY Cullin repeat-like 131 676 IPR016159 -
Seca9g06045 689 MobiDBLite consensus disorder prediction 469 492 - -
Seca9g06045 689 MobiDBLite consensus disorder prediction 36 55 - -
Seca9g06045 689 FunFam Exocyst subunit Exo70 family protein 120 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06045 Seca-Chr9 175026364 175028433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06045 18 678 EXO70 exocyst subunit family AT5G13990 49.211 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06045 K07195 - gmx:100819960 892.108