Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06041 ATGGCTACCAACACACTGATGAGCTCTGCTATCACAGCCTTCCCTTCTCTTCTTTCTTCCTCAAAATCCAGATTTGCCTCTGCAGTCCCACTTTCCTGCTTTGGTTCCAATGCTTCTTCTCGCTTCACCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGCTCTGCTCCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGATTCAAGGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGCTTAGGCAATTGGGTAAAAGCTCAGGAATGGGCAGCAGTTCCTGGGGGCCAAGCAACCTACCTAGGAAACCCTGTTCCATGGGGCACCCTCCCAACCATTATTGTCATTGAATTCCTTTCTATTGCATTTGTGGAGCACCAGAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTCCATGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCTCTTTTGGCTTTTGTGGGGTTCTGTGTTCAACAATCAGCTTATCCTGGCACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGGAATATCATTATTCCCCAATAG 723 0.4786 MATNTLMSSAITAFPSLLSSSKSRFASAVPLSCFGSNASSRFTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTIIVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPQ. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06041 240 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 45 235 IPR001344 GO:0009765|GO:0016020
Seca9g06041 240 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Seca9g06041 240 SUPERFAMILY Chlorophyll a-b binding protein 38 237 - -
Seca9g06041 240 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
Seca9g06041 240 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06041 Seca-Chr9 174994235 174996263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06041 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 81.818 1.37e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06041 K08907 - gmx:100305992 460.299