Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06035 ATGCCGCCGGAACCGATACCGTGGGATCGAAAGGACTTGTTCAAGGAGAGGAAGCACGAGAGGTCTGAGTCTTTAGGGCCCGTGGCCAGATGGAGAGACTCCTCCGGCTCCCGAGAGTACAATCGCTGGGGATCGCCAGATTTTCGCCGAGCCCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTCCAGAAGAATCTGGTCATGGTTATGGACTTTCTCGAGGGGAAGCAGACAACTGTCGGCCATCACTTTCTCGAGGGGATGGAAGGTATGGCAGGAGCAATAGGGAAAGTAGAGGGTCCTTTAGCCAGAGAGATTGGAGAGGTCCTTCGTGGGAAACCACTAACGGCCCTCTGAATTTTTCCCGGAGGCAACCGGGTGTGAATAATGACTGGAGGTCAGTTGATGATATGGTAACATATTCCTCTCATCCACATTCTGAGTTTGCAAACACTTGGGAGCAGCATCACTTGAAAGACCAGCGTGATAAGATGAGTGGTGTCAATGGATTGAGTACAGGCCAGAGACGTGTCAGGGACAGTTCTCTGGATTCGATTGACTGGAGGCAACTTAAATGGACCCGTTCTGGAAGCTTGACTTCACGAGGGTCAGGCTTTTGCCCCTCAAGTAGCTTGAGGAGCACAGCGGCGAGAGATTCCTGTGAAGGGAAGGCTGGGTTGCAACAAAAAAATGCAACAGCTGCTGAGTCAAATTCAGGGGAAGCTGCTGCATGTGGGACATCTGCTCCATCTGAAGAAACAAATTCGAGGAAGAAGCCCAGGCTAAATTGGGGTGAGGGACTTGCGAAGTTTGAGAAAAAGAAAGTTGAGGGGCCTGATCTAATTGCAAACAAAGATGATCCTGTCTTGTCTCCTATTAATATGGAACCTAGTAATTTCCTTGGTCCCAGCGTAGTAGATAAAAGCCCAAAAGTTTCAGGATTTTCAGAATGTGCATCCCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCGCCAGGTGTGGATGATAAATTGTTTGGAAAAGCTGCAAATGTGGACAATGATGTTAATAATTTAAGTGGTTCACCTGGTCCTGGGTCTCAAAATCATCTGCAGATGGTTTCTTTCAATTTAGAGAAGGTGGGTATTGACTCATTGACTAGTTTGGGCTCTTTACTTGCTGAGTTGCTAGAGTCTGATGATCCAAGCTCCGTGGATTCTAATCTATTAAGATCTCCTACAATGAATAAGTTGCTGATATTGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAAACTGAAATTGATTTATTAGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGATAGGTTTCCATGTTCTGCAGCAGTTAGTTCCTTGCTGGCATGTTACAATGCAAAATCTTGTGATGAACATGTTGGAGGCTTTGACAAGGTTGCTCATCCAGAACCATTGCAAATGGTTTCTTCTGATGACCCTAATGTGGAGAAGGTGGCTTTTCCTACTGATTTGCATGATATTCATGATAATGGCAAGGAAGATGATATTGACACTCGTGGAACTGCAATGTCTAATTTTGTGGAGCCCCTGCCCTTGATTAATGCAGTTTCTTCATGTGATGTGGATAGATACGGTACTTGCTCTGAAGACTTGGATGGAATTCAGTCTAAAGCAGTAAAATGCTTAGTTCCCTGTACTTATAGGCAAATTGCCAGTGTATCTGTGTGTGATGGTAATTCATCTATGGAGGTTAAAGATGGCATGTATGCTAAATCCGGAGCAAGCTTTTATTCCAGCCCTGAGGATATTTTAAATGATACAATTATTTCTTGCAATAAAGAAACTGCAAAAATAGCATGTGAAGCATTTTCTAAGTTATTGCCAGAAGAATGTGGTAAGATCAGTAATATTGGAGCTATCAGTGGCTCATGCTCTGACGAGGGGGCATTCATCATAGAAAAATTTGCAGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTCTAACACTCAAGTTTAAAGCCTTGCATCACCTGTGGAAAGAAGATTTGCGCTTACTGTCTATTAAGAAATGCCGCCCAAAATCTCACAAGAAACTTGAATTAGGTCTACGAACTGTCAGTAATGGTCATCAGAAGAACCGTTCTATTCGTTTTCCCTCCCCTGCAGCGGGAAATCAACTTAGCTTGGTTCCAACATCTGAGATTATTAATTATACAAGCCAACTACTTTCAGATTCTCAAGCTAAAATTCACAGGAGCACCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAAATGTTTTCAAAGTTTTTATCTAGTAATGGGCTGATTGATGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAACCCTTGGACATCAGAAGAGAGAGAGATCTTCTTGGAGAAATTTGCAGCCTTTGGAAAAGATTTTCGGAAAATTGCATCTTTCCTTGACCACAAGACAACGGCTGACTGTATTGAGTTCTACTACAAAAATCACAAGTCTGATTGTTTTGAGAAAATTAAGAAAAAAGATGGTGGTAAACTACGGAAGTTGTTTACAACCAAAACTGACTTGATGGCATCAGGTAAAAAATGGAAACCTGATATGAATGCTTCTTCACTTGAGATTTTAAGTGCAGCTTCAGTGATGGCAGGTGGCATTACAGGTAACCGAAAAATGCGCTCAGGAAGTTCCATTTGGAGTGGATATGGTGATTTAAAAACATCAAGGGGTGAGGATAGCATCGCAGAGAGATTAAGTGGTTTTGATGTTCTTCAAGATGAAAGAGAGACTGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTCCATCTGAGGTTATGAGTTCATGCATAAACAGTTCAGTTGAGCCTGTGGAAGGTAACAGGGATATGAAAGTGAGATCTCTATGCAAACAATCTGTGGTGCCTGATGTTACTCAGAATATTGACGATGGAACTTGTTCTGATGAGAGCTGTGGTGAAATGGATCCTACTGATTGGACAGATGGGGAGAAGGCAGCCTTTATTCAGGCTGTATCATCTTTTGGAAAGGATTTCATGATGATTGCACGGTGTGTTGGAACAAGGTCCCGAGATCAGTGCAAAGTGTTTTTCAGCAAGGCTCGTAAATGCCTTGGATTGGATCTTGTGCACCCCAGACCTGAAAATATTGGATCACTAGTGAATGATGATGGAAATGGTGGCAGGAGCGACCCAGATGATGCATGCGTTCTAGAGAAAGGTTCAGTTATTGAGTCTGATATGTCAGGTGCTAAAACAGATGAGGACCTGCCTCCATCTGTCATGAACACATACCATGATGAATCCAGAGCCATGGAGGCTAGGGACCTGTCAGCTGACTTAAATGAATCAAAAAAAATGGGAGGTGCAGTTACAGAATTGGTGTCTGCTTCAGACATAATTGAACCATGCTACACTAATCCTGTTGCTGATAGACTGGTTTCTGAGGTTTCTTCTGGGTGTCGTGGAAATGAATTTGAGGGTTCAGATATCCGTCTCGTTGACAGAGATGATATACTTGAAGCTGATACAGATGTTGTAGTTGAATTGAAACACCAAGCCTACCATTCAAGCACTCTAGTAAATACTTCAGTATCATCTGTAGGCATTTCTTGTTCAAGATTGAGTTTTGATGCTGAAAACCAGCCCCAATTCTGTCTTGATGGAAAGCCTCATTTATCAGGACCATTGGAGGATCCTCCTCCGACTGCAAATCCAATGTTGCAAAATACTGCTGGTGCTACTGTACAACATGAAAAAACAGCTAGCCAAAATCCACTGTCTTCTACTTGTGATTTTCATGGAAGTAAAGATATCAGTGGTCATAGTTCCAGTAGTAATGGTGGCTGTCAGCTTCATAATCCTGGGAATCTATTAGACAATGTTGAGGCTGCTAGAATCCTTCAGTGCAATCCTTTGCAAGTGCCTGTTAAGGAAGTGAATGCAGATATAAGGTGCAGCAGTTCAGAGTTGCCTTTTTTGTCCCAAAAGATTGAACAAGCTGATGATAATTGCACAACACAGTTGCTGTGTTTGTCAGATTCAGAAAAAACATCAAGAAATGGTGATTTGAAACTGTTTGGGAAGATCCTAACCAATCCTTCATCAACCCAGAATCCTACTTTAACTGCCCAGGGAAACGAAGAAAATGGTACCCATCATCCGAAGTTAAGCAGCACCTCTTCTAGTCTAAAATTTACTGGCTGTCACAATGCTAACAGAAAATCTACTATTTTGAAGTTTGATCATAATGATAACCAGGGCCTTGAAAATGTTCCCATCATGAGTTATTGGGATGGGAGCAGAAAACAGCCTGGTTTATTATCATCACTACCTGATTCTGCCATTGTGCTTGCAAAATATCCTGATGCATTTAGTAATTACCCTACATCTTCCAAATTAGAGCAACAGTCATTGCAGATGTTGGCCAAGAATGAACAACACCTGAATGGAGTATCTGCTTTTACAACTACAGAAGTCAACGGAAGCAATGGTGTCATTGATTATCAGGTGTTTAGAAATAGGGATGGTCTGAAAGTGCAGCCATTTCTGGTAGATGTTAAGGATCACCAAGATGTGTTCTCTGAGACGCAGAGAATAAATGGTTTTGAAGCAATCTCAAGTTTACAGCAGCAGGGTAGGGGAATGGTGGGACTGAATGGTGTTGGGAGATCAGGGATTCTTGTGGGAGGATCAGGCGCCGGAGTCTCGGATCCTGTGGCTGCCATCAAAATGCATTTTTCCAATGCTGACCAATATGGCAGTCAGACTGGGAGTATCATGAGAGGATGA 4830 0.4265 MPPEPIPWDRKDLFKERKHERSESLGPVARWRDSSGSREYNRWGSPDFRRAPGHGKQGGWHLFPEESGHGYGLSRGEADNCRPSLSRGDGRYGRSNRESRGSFSQRDWRGPSWETTNGPLNFSRRQPGVNNDWRSVDDMVTYSSHPHSEFANTWEQHHLKDQRDKMSGVNGLSTGQRRVRDSSLDSIDWRQLKWTRSGSLTSRGSGFCPSSSLRSTAARDSCEGKAGLQQKNATAAESNSGEAAACGTSAPSEETNSRKKPRLNWGEGLAKFEKKKVEGPDLIANKDDPVLSPINMEPSNFLGPSVVDKSPKVSGFSECASPATPSSVACSSSPGVDDKLFGKAANVDNDVNNLSGSPGPGSQNHLQMVSFNLEKVGIDSLTSLGSLLAELLESDDPSSVDSNLLRSPTMNKLLILKADISKVLEVTETEIDLLENELKSLKSESGDRFPCSAAVSSLLACYNAKSCDEHVGGFDKVAHPEPLQMVSSDDPNVEKVAFPTDLHDIHDNGKEDDIDTRGTAMSNFVEPLPLINAVSSCDVDRYGTCSEDLDGIQSKAVKCLVPCTYRQIASVSVCDGNSSMEVKDGMYAKSGASFYSSPEDILNDTIISCNKETAKIACEAFSKLLPEECGKISNIGAISGSCSDEGAFIIEKFAEKKRFARFKERVLTLKFKALHHLWKEDLRLLSIKKCRPKSHKKLELGLRTVSNGHQKNRSIRFPSPAAGNQLSLVPTSEIINYTSQLLSDSQAKIHRSTLKMPALILDEKEKMFSKFLSSNGLIDDPLAIEKERAMINPWTSEEREIFLEKFAAFGKDFRKIASFLDHKTTADCIEFYYKNHKSDCFEKIKKKDGGKLRKLFTTKTDLMASGKKWKPDMNASSLEILSAASVMAGGITGNRKMRSGSSIWSGYGDLKTSRGEDSIAERLSGFDVLQDERETVAADVLAGICGSLPSEVMSSCINSSVEPVEGNRDMKVRSLCKQSVVPDVTQNIDDGTCSDESCGEMDPTDWTDGEKAAFIQAVSSFGKDFMMIARCVGTRSRDQCKVFFSKARKCLGLDLVHPRPENIGSLVNDDGNGGRSDPDDACVLEKGSVIESDMSGAKTDEDLPPSVMNTYHDESRAMEARDLSADLNESKKMGGAVTELVSASDIIEPCYTNPVADRLVSEVSSGCRGNEFEGSDIRLVDRDDILEADTDVVVELKHQAYHSSTLVNTSVSSVGISCSRLSFDAENQPQFCLDGKPHLSGPLEDPPPTANPMLQNTAGATVQHEKTASQNPLSSTCDFHGSKDISGHSSSSNGGCQLHNPGNLLDNVEAARILQCNPLQVPVKEVNADIRCSSSELPFLSQKIEQADDNCTTQLLCLSDSEKTSRNGDLKLFGKILTNPSSTQNPTLTAQGNEENGTHHPKLSSTSSSLKFTGCHNANRKSTILKFDHNDNQGLENVPIMSYWDGSRKQPGLLSSLPDSAIVLAKYPDAFSNYPTSSKLEQQSLQMLAKNEQHLNGVSAFTTTEVNGSNGVIDYQVFRNRDGLKVQPFLVDVKDHQDVFSETQRINGFEAISSLQQQGRGMVGLNGVGRSGILVGGSGAGVSDPVAAIKMHFSNADQYGSQTGSIMRG. 1610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06035 1609 Pfam Myb-like DNA-binding domain 793 834 IPR001005 -
Seca9g06035 1609 Pfam Myb-like DNA-binding domain 1005 1045 IPR001005 -
Seca9g06035 1609 SMART sant 1002 1050 IPR001005 -
Seca9g06035 1609 SMART sant 790 838 IPR001005 -
Seca9g06035 1609 ProSiteProfiles SANT domain profile. 1004 1052 IPR017884 -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 233 266 - -
Seca9g06035 1609 Coils Coil 417 444 - -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 233 254 - -
Seca9g06035 1609 CDD SANT 1006 1044 IPR001005 -
Seca9g06035 1609 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1210 1598 - -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 1260 1294 - -
Seca9g06035 1609 ProSiteProfiles SANT domain profile. 789 840 IPR017884 -
Seca9g06035 1609 SUPERFAMILY Homeodomain-like 777 837 IPR009057 -
Seca9g06035 1609 SUPERFAMILY Homeodomain-like 1003 1052 IPR009057 -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 1 129 - -
Seca9g06035 1609 Gene3D - 956 1061 - -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 105 129 - -
Seca9g06035 1609 Gene3D - 770 842 - -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 8 27 - -
Seca9g06035 1609 MobiDBLite consensus disorder prediction 1376 1409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06035 Seca-Chr9 174690715 174699935 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca9g06035 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g06035 - - lang:109337705 1842.01