Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g06011 ATGTACACATCAAGGAAGAAAATTCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTAGAAAACACCAACCATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCAGTCCAAATTGATGTTTCTGGCAACCGTAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGTTTCCGCAAGATTCATGTTAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGTGGCAAGGATGTAATCTTGGTTGCCACCCGGAGGATATTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCACCCGTACACTGACTGCTGTGCATGAGGCAATGCTGGAGGATATTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTTAGGTATCGAGTTGATGGATCCAAGATTATGAAGGTTTTTTTGGACCCCAAGGAGCGAAACAATACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAATTTTCGGGCAAAGATGTTGTGTTTGAGTATCCAATTACTGAGGCTTAG 576 0.4306 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNHELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPITEA. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g06011 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Seca9g06011 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Seca9g06011 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g06011 Seca-Chr9 174417028 174418608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g06011 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 7.37e-114 320