Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05995 ATGCAGACTGAGAAGACTAATAAGGAAGAAAAGAAGGTAGATGATTCAAAACAGATTGAGAAGACCATAAAGGAAGAAAAGAAGGCAGATAGTTCAATACAGACTGAGAAGATTAAGAATGAGGAAAAGAAGACAGATGACTCAATACAACATGAGAAGACTAAAATGGAAGAGAAGAAGGCAGATGACTTAATACAGACTGAGAAGACTAAAATGGAAGAAAAGAAAGATGTCTCAACACAGACTGAGAAAACAAAAGAGGAGGAAAAGAGGGTAGATGATAAAGAAATTATTAGATTGAATAAAGAGCTGGATGACAAAAACATGGAAATTTCAACATTGAAGCAAGAACTAGAAAAAATGAGAAAAACATATGAAGTACAATGCTCACAGTTGGAAGCACATGCTGCGGATGCTAAAGGAGAACTGAAACAGAAATCACAAGAATATGAGAATCAGTTGGAAAGATTAAGAAATAAGGTTAAAGAGAATGAGGCCTTTACTGAGTCTAAATATCAGAAGTGGATCATGAAAGAGAAACAAATACAGAAAGCTGTCACTTTTCAGTTTAGTTCCATACAGAAATTGAAATTGTCATGGGAATCCATTAAGCAAGATGTTATGAAAGGGCAAATGGTTTATGCAGAGGAATGTAATCGATTAGGTGTAAATCTTAAATCACTAATAGATGCAGCTGAGAGTTATCAATCAGTTCTTTCAGAAAATCGAAAACTGTTTAATGAGATTCAAGAATTAAAAGGAAATATCAGAGTATATTGTAGACTCAGACCATTTCTACCTGGACAAAAGGAAAAACAGTCTATTGTGGAACACATTGGTGAAACTGATTTGGTTGTGGCAAATCCCTCCAAACAAGGAAAAGAAGCCCTTAGAACATTTAAGTTTAACAAGGTCTTTGATCCAGCCTCAACTCAAGCTGAGGTATATGCTGACATACAAGGCTTTATAAGATCAGTACTTGATGGGTATAATGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACCTACACAATGAGTGGTCCAAATGGTGCAACAAGTGAGACTGTTGGTGTTAACTATAGAGCTCTGAATGACCTCTTCAACATATCCTCAAGTAGAAAAAGCTCCATAGTCTATGAAATTGGGGTTCAAATAATTGAGATATATAATGAACAAGTGCGAGATTTGTTATCAGTTGAAGCTTCTCCAAAAAAACTTGGGATATTGAATCACTCTCAACCAAATGGTTTAGCAGTACCAGATGCTAGCATGCAACCTGTGAAATCAACTGCAGATGTCATGAAACTAATGGACATTGGTCTTAAAAATAGAGCCAAGGGTGCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTTTCAATTCATGTTCGTGGGGTGGATAAGAAATCTGGCTCTTCTCTTCAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGACTTAAGGAAGCACAACATATTAACAAATCACTATCTGCACTTGGAGATGTCATTTTTTCCCTTTCTCAAAAGAGTGCTCATGTACCATACAGAAACAGCAAGCTTACTCAACTTTTGCAAACATCACTTGGTGGTCAAGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCTGAATCTTTAAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCAAGAAGTACCAAAGAGGGCAGAGATGTCAGAGAATTGATGGAGCAGGTGGCTTCTCTGAAAGATACTATTTTGACAAAAGATGAGGAGATTGAGCGGCTACAGTTACTTAAGGAACTGAAAAATGTTCAGCCCAATGTCAATTCTGAGAAGCTTGAAACTGCCACTGATTGA 1932 0.3701 MQTEKTNKEEKKVDDSKQIEKTIKEEKKADSSIQTEKIKNEEKKTDDSIQHEKTKMEEKKADDLIQTEKTKMEEKKDVSTQTEKTKEEEKRVDDKEIIRLNKELDDKNMEISTLKQELEKMRKTYEVQCSQLEAHAADAKGELKQKSQEYENQLERLRNKVKENEAFTESKYQKWIMKEKQIQKAVTFQFSSIQKLKLSWESIKQDVMKGQMVYAEECNRLGVNLKSLIDAAESYQSVLSENRKLFNEIQELKGNIRVYCRLRPFLPGQKEKQSIVEHIGETDLVVANPSKQGKEALRTFKFNKVFDPASTQAEVYADIQGFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATSETVGVNYRALNDLFNISSSRKSSIVYEIGVQIIEIYNEQVRDLLSVEASPKKLGILNHSQPNGLAVPDASMQPVKSTADVMKLMDIGLKNRAKGATAMNERSSRSHSVVSIHVRGVDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFSLSQKSAHVPYRNSKLTQLLQTSLGGQAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKELKNVQPNVNSEKLETATD. 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05995 643 Gene3D Kinesin motor domain 196 584 IPR036961 -
Seca9g05995 643 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 197 584 - -
Seca9g05995 643 Coils Coil 596 616 - -
Seca9g05995 643 PANTHER KINESIN-LIKE PROTEIN KLP-3 23 624 IPR027640 GO:0003777|GO:0007018
Seca9g05995 643 ProSiteProfiles Kinesin motor domain profile. 255 582 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 620 IPR027417 -
Seca9g05995 643 Coils Coil 235 255 - -
Seca9g05995 643 Coils Coil 97 167 - -
Seca9g05995 643 SMART kinesin_4 253 590 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 Pfam Kinesin motor domain 261 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 PRINTS Kinesin heavy chain signature 329 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 PRINTS Kinesin heavy chain signature 483 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 PRINTS Kinesin heavy chain signature 452 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 PRINTS Kinesin heavy chain signature 532 553 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g05995 643 MobiDBLite consensus disorder prediction 1 92 - -
Seca9g05995 643 Gene3D - 93 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05995 Seca-Chr9 174139830 174146260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05995 243 582 Calmodulin-binding Proteins AT5G65930 38.372 2.59e-68 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05995 K10406 - gmx:100779403 904.434