Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05973 ATGTTTCCTTCAACTTTAGCAATCTCATGGATCATTTTGGCCTTTATATTCATCCTATCAGCTACCCTGTTGCGGAAACAAAGCCAACATGACCGGAAACAACCACCAGGTCCACCAGCTCTGCCAATTTTGGGCCACCTTCACTTATTGGGGAACCTTCCCCACCGCACCCTTCAAACCTTGTCCAAAAAATATGGCCCCATCATGTCCCTTCGATTGGGACAGGTCCCAATCATTGTGGTCACTTCCCCTGAAGCTGCGGAGCAATTCCTAAAGACCCATGAATTTGTTTTTGCAAGCAGACCAAAAATTGAAGCCTCCAAGTACCTCTCTTATGACTACAAGGGCTTGGTGTTTTCTCAGTATGGTGCTTACTGGCGTAACATGAGGAAAGTGTGCACCTTGCACCTTCTGAGTGCTTTGAAAGTTGAGTCCTTTGCTCCTTCGAGGAAGCAAGAGGTGGAAGCAGCTGTTAAATTGATTCAGAAAGTGGCAATGGTGGGTGAGGTTGTGGACTTGAGTGAAGTGGTGCATGGGCTTTTGGAGGATATTGTGTATAAAATGGTGTTGGGGTGTAGCAAGGATGATAAGTTTGATTTGAAGGGGCTTATCCAAGATGCATTGCTTCTTGCTGGAAAGTTTAATGTCACAGATTATGTGCCTTGGCTTGGGATATTGGATATACAGGGTCTAAGACGAGGCTTCAAGAAAACTAGTAAAGCACTTGATGAAGTGCTAGAGAAGATAATCAAGGAACATGAACATGCTTCCAATGCACAACATAAGGACTTCATTGACATATTACTCTCAATGATGCACCAACCAATTGATCCTTATAATGATCAAAATCATACCATTGATCGAACAAACATAAAGGCTATTGTCATAGACATGATTTCTGCGGCATATGATACTTCTACTACTGTTATTTTGTGGGCTTTATCTGAGCTATTAAGGCATCCAAAAGTGATGAAAAACCTTCAAGATGAGCTAGGTACTGTGGTAGGAATGAGCAAATTGGTGGAGGAGACTGATTTAGTAAAGTTGAGTTATTTGGATGTGGTGATTAAGGAGACATTAAGATTGCATCCTACTGCTGCAACATTGATTACCCGAATGTCAACAGAGGATACTACGATTAATGGTTATTACATAAAGAAAAATTCAGGAATTTTCATAAATGTATGGGCAATAGGACAAGATCCGAAGGTTTGGTCTGATAATGCTGATGAGTTTTATCCAGAGAGATTCATCAATAATAACATAGACATTCGAGGATGTGACTTTAGAATGTTACCATTTGGCTCTGGTCGTAGAGGCTGTCCTGGGATGAACTTGGGTCTTGTTACTGTTAAGCTTATTCTGGCTCAATTAGTACATTGCTTTAATTGGAAGCTTCCACAGGGTATGGCTCCTGAAGACTTGGACATGAGTGAGGAATATGGCATAACAGTGCCGAGAGCCACACACTTGTTTGTTGTGCCCACATGTCGTCTTCTTAGCCCAACCCTGGATTAA 1518 0.419 MFPSTLAISWIILAFIFILSATLLRKQSQHDRKQPPGPPALPILGHLHLLGNLPHRTLQTLSKKYGPIMSLRLGQVPIIVVTSPEAAEQFLKTHEFVFASRPKIEASKYLSYDYKGLVFSQYGAYWRNMRKVCTLHLLSALKVESFAPSRKQEVEAAVKLIQKVAMVGEVVDLSEVVHGLLEDIVYKMVLGCSKDDKFDLKGLIQDALLLAGKFNVTDYVPWLGILDIQGLRRGFKKTSKALDEVLEKIIKEHEHASNAQHKDFIDILLSMMHQPIDPYNDQNHTIDRTNIKAIVIDMISAAYDTSTTVILWALSELLRHPKVMKNLQDELGTVVGMSKLVEETDLVKLSYLDVVIKETLRLHPTAATLITRMSTEDTTINGYYIKKNSGIFINVWAIGQDPKVWSDNADEFYPERFINNNIDIRGCDFRMLPFGSGRRGCPGMNLGLVTVKLILAQLVHCFNWKLPQGMAPEDLDMSEEYGITVPRATHLFVVPTCRLLSPTLD. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05973 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Seca9g05973 505 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 FunFam Cytochrome P450 83B1 22 494 - -
Seca9g05973 505 CDD CYP71-like 64 491 - -
Seca9g05973 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05973 505 PANTHER CYTOCHROME P450 93A3-LIKE 10 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05973 Seca-Chr9 173675764 173678177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05973 15 499 Cytochrome P450 AT5G07990 39.683 8.29e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05973 - - aprc:113867069 722.62