Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05970 ATGTTCACCACACTAACCATCCCTGCAATACTCGTTTTCATATTCATATTCATATTCATCCTATCATTCCTTCTTGTATTGCATCCAAAACGACGTCGTGAAGATAATGGGAAACCTGCAGCACCACCAGGTCCAAAAGCGTTACCAATTATTGGTAACCTCCATATGTTAGGGAAACTCCCACATCGCAACCTTCAATCCCTTGCCACAAAACACGGGCCCATAATGTCCTTAAAGTTAGGACAAGTCCCAGCCATCGTGGTATCTTCCACTGAAACAGCAGAACTGTTCCTCAAAACCCACGACACCGTGTTTGCCAGCAGGCCTAAACTTCAAGCCTCGGAGTGTCTCTCTCATGGAAGCAAGGGTTTTGCGTTTTGTGAGTATGGTCCATACTGGCGAAACGTGAGGAAAGTGTGTACTTTGCAGCTTTTGAGTGCATCCAAAGTTGAGATGTTTGCTCCCCTGAGGAGGGAGGAGTTGGGGATGTTGGTGAAGTCACTTAAAAATGCAAGAGAGGTTGTGGATCTGAGTGAGTTAGTTGGGGAGCTAATAGAGGGCATTGTGTATAAAATGATATTGGGGCGAAGTAAGGATGAAAGGTTTGACATAAAGGAACTTATTCATGAGGTAATGAACTTGGTTGGAGCATTCAATGTTGCAGATTTTCTGCCTTGGCTTGGCGTCTTTGATCCTCAGGGACTAACAAGACGACTAAAGAAAGCAAGTAAGGAGTTCGACCAAGTCGTGGAGCATATTATCAAAGACCATGAGCATCCATCTAATAAAGAACAAAATAACTCACACAAAGACTTCGTAGATATATTGCTATCTTTTATGCACCAACCCATAGATCCTCATGATGAACAAAATGTCATTGATAGAACTAACATCAAGGCCATTATATTGGACATAATTGCCGGAGCATTTGACACATCTACTACTACAATTGATTGGGCTATGTCAGAACTCTTAAGGCATCCAAGGGTAATGAAAAAACTTCAAGATGAGCTAGAAAATGTAGTGGGGATGAATAGAATGGTAGATGAGAGTGATTTAGAGAATTTGCCTTATCTTAATATGGTGGTGAAGGAGACACTACGTCTATATCCGGTTGCACCTTTGCTATTGCCTCGTGAGACTCGAGAAGATGTCATTATCAATGGTTATTACATAAGGAAAAAATCAAGAGTCATAATAAATGCATGGACCATAGGACGAGATCCTAAAGTTTGGTCAAATAATGCTGAGACTTTTTATCCAGAAAGATTTGCCAATGGTAGTGTGGATATTCGTGGAAATGACTTTCGAGTTATACCATTTGGTTCGGGTCGTAGAGGTTGTCCTGGGATTCATCTGGGTCTAACAACTGTTAAGCTTGTTCTATCTCAATTGGTGCATTGCTTCAATTGGGAGCTTCCATTGGACATGTCTCCTAGTGACTTGGACATGAATGAGAAATTCGGTCTAACAATGCAAAAAAGTAAGCACTTGCTAGTTATGCCAATTTATCGACTAGTTTGTGAAGTTAAAAGCGGGTGA 1542 0.4131 MFTTLTIPAILVFIFIFIFILSFLLVLHPKRRREDNGKPAAPPGPKALPIIGNLHMLGKLPHRNLQSLATKHGPIMSLKLGQVPAIVVSSTETAELFLKTHDTVFASRPKLQASECLSHGSKGFAFCEYGPYWRNVRKVCTLQLLSASKVEMFAPLRREELGMLVKSLKNAREVVDLSELVGELIEGIVYKMILGRSKDERFDIKELIHEVMNLVGAFNVADFLPWLGVFDPQGLTRRLKKASKEFDQVVEHIIKDHEHPSNKEQNNSHKDFVDILLSFMHQPIDPHDEQNVIDRTNIKAIILDIIAGAFDTSTTTIDWAMSELLRHPRVMKKLQDELENVVGMNRMVDESDLENLPYLNMVVKETLRLYPVAPLLLPRETREDVIINGYYIRKKSRVIINAWTIGRDPKVWSNNAETFYPERFANGSVDIRGNDFRVIPFGSGRRGCPGIHLGLTTVKLVLSQLVHCFNWELPLDMSPSDLDMNEKFGLTMQKSKHLLVMPIYRLVCEVKSG. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05970 513 PANTHER CYTOCHROME P450 93A3-LIKE 15 506 - -
Seca9g05970 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Seca9g05970 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 SUPERFAMILY Cytochrome P450 41 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca9g05970 513 FunFam Cytochrome P450 83B1 29 501 - -
Seca9g05970 513 CDD CYP71-like 71 498 - -
Seca9g05970 513 Pfam Cytochrome P450 42 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05970 Seca-Chr9 173538510 173545449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05970 49 510 Monolignol Biosynthesis Gene Families AT4G36220 42.678 1.17e-126 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05970 - - aprc:113867069 776.548