Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05961 ATGGAAATTAACCTTACATCAAGAAAAATCATTAAACCATCGTTGCCAACTTCCAATGAATCCAAGACCCACAAACTATGTTTATTTGATGTGTTTCAACTCAACACCTATTTCCCACTAATCCTATTTTACCGCAAAACAAAAGACATGCCTGGATTCTCAGACATTTCAACTCAATTGCAGAAATCACTATCTGAGGCACTAACCATCTTCTACCCTCTTGGAGGTAGAAGAAGTGATTCCTTCACCATCAATTGCAACGATGAGGGTGCAATTTACATTGAAGCCTCAGTGAACATCAACATGGACAAGTTCCTAAAACCACCCAAAATAGAATTCATAAACAAATTGCTTCCATGTGAGCCAAACAAAAAGCACCCTTACCAACAAGTCTTGCCTCAACTTCAAGTCCAAGTAAACATTTTCAATTGTGGAGGGATAGCTATTGGGTTGTGCAATCTCCACACTATCCTTGATGCATTGTCTTGTAGTGCCTTCTTGAAAACTTGGTCTTCCATTTGCAATGGTTCAAGGGATGGAATTTCATTGCCAGATTTCTCCTCTGCTTCTTCTCTGTTCCCTCCAAGAAACACCTTTGGTGTACGTGCTGGTGTGCTGAATATTGACAAAAGCTCAGAGATTGAAGTTCAGTGCACCACAAGAAGATTCTTGTTCATGACCAAATCAATCAATGAACTTCAAGCCATGTCTGAAAATGATGGAATCTATCCTAGGCCTACACGTTACAAGGCAGTGTCTTCATTCATCTGTAAACACATGATTGTAGCATGCACAGAGGAACCTTGTGATAGAACCAGGCCAGTGGTAGTGTTACATGTTGTGGACATGAGGAAAAGGATGGGAGAACCATTCTCACAAGATTCTATTGGGAACTTGTTGTGGCCTGCAGTGGTGCTTTGTGAGAATGTTAACAAGGACAGTAAAGTTGGAGACTTGGTTAGACTTTTGGAGCAAGAAATTGGAAAGCTTACAAAGGAATTGTTTCTGAAAGTGCAAAATGATCCTGGTTTTATGTGGAGTGATGAGTGTGCACAACTAATGCTTGAAGGAATGGCCAACAAAAACCCAATTTCGTTTGTGTTCACGAGCTGGGTTAATATGGGGTTCAGAGAATTGGACTTTGGTTGGGGAAAGCCTCTATGGCTAGCTCAACGAGGAGGCACTAAAGAAAGTATTCCAAACACAGTAGTGTTGATGGAAACGGATGAGGGAATAGAGGCGTGGGTGACAATGGAAGAGAAACATATTTCTATCTTGGAAAATGATGTAGAGTTCCTCAGATTTGCTTTGCTTAATCCTAGTGTTTCAAACATATAG 1338 0.4058 MEINLTSRKIIKPSLPTSNESKTHKLCLFDVFQLNTYFPLILFYRKTKDMPGFSDISTQLQKSLSEALTIFYPLGGRRSDSFTINCNDEGAIYIEASVNINMDKFLKPPKIEFINKLLPCEPNKKHPYQQVLPQLQVQVNIFNCGGIAIGLCNLHTILDALSCSAFLKTWSSICNGSRDGISLPDFSSASSLFPPRNTFGVRAGVLNIDKSSEIEVQCTTRRFLFMTKSINELQAMSENDGIYPRPTRYKAVSSFICKHMIVACTEEPCDRTRPVVVLHVVDMRKRMGEPFSQDSIGNLLWPAVVLCENVNKDSKVGDLVRLLEQEIGKLTKELFLKVQNDPGFMWSDECAQLMLEGMANKNPISFVFTSWVNMGFRELDFGWGKPLWLAQRGGTKESIPNTVVLMETDEGIEAWVTMEEKHISILENDVEFLRFALLNPSVSNI. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05961 445 Gene3D - 1 203 IPR023213 -
Seca9g05961 445 PANTHER F21J9.9 6 436 - -
Seca9g05961 445 Gene3D - 216 434 IPR023213 -
Seca9g05961 445 Pfam Transferase family 2 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05961 Seca-Chr9 173324155 173325492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05961 1 427 Monolignol Biosynthesis Gene Families AT5G48930 22.398 8.34e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05961 - - gmx:102667966 689.493