Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05949 ATGTTTTTTGTTATAAAAAGCAAATCATATATAAACCCCTTTTATGTTCTTGTCCTTCATATCTTGCTCATGCATCCTCACACCAACAACCCTTTTAACTCTCACTCTCAGGTCCCCAATTCTTCAGGAAAAATGGCTGCTAAAAGGCTTTTTGATGATTCTGATGAAGATCACTCTGATGATAAGCCAAGCGACAAAAGGATGAGGCCTAATAGACCTTCTTTTGCTTCTGTAATAGGAGAAGTGGTTATGGTGAAAAACCTGCAGAACCTTTTCTCAGCCTTGGAACCTCTGCTTAAAAGAGTGGTGAGTGAAGAGGTTGAGAGAGTGATGAGACAATGCTGTCCACTCTTTATGACAAGGTCACCTTCATTGAGAATCCAAGCAGCAGAGCAGCCATCCACTCTGCAACTCTCATTCAACAAAAGGCTTTCCCTCCCTATCTTCACAGGTAGCAGGATCCTTGACATTGATGGAAACCCCATCAACATAACTCTAATTGACAAAAGCAATAATAATAATGGCCAAGGGGTTCCCACAAGTCTCCCTCATCCAATCAAGCTAGAGATTGTGGTTCTTGATGGAGACTTTCCACCAGGTGATAATAATGAATTAGATTATTGGACTAATGAGCAATTCAATAGCCACATAGTGAAGGAGAGAACAGGGAAGAGACCATTGCTTGCAGGAGAATTGAACCTCACCATGAGGGATGGGATTGCACCAATAGGGGACATAGAGTTCACTGATAACTCTAGTTGGATTAGGAGCAGGAGGTTCAGAGTTGCAGTGAGGGTCACACCAGGGAGTAATCAAGGTGTTAGGATTCAAGAAGGGATGACAGAGGCATTTGTTGTTAAGGATCATCGTGTGTACAAGAAACACCACCCACCAATGCTTCATGATCATGTGTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAGAAAATTGTCCTCAGAGGGGATCAAAACTGTGCAAGACTTTCTCAAATTAGCAGTTGTTGACACTGAAAGGCTAAGAAAGGTATCTCTCTATCTTTATATTTTAGGCATTGGGATGTCAGACAAAATGTGGGAAGCCACAATCAAGCATGCAATGACTTGTGAAATGGGGAGCAAGATCTATATATACCGTGGACCTCAATTTACTATTTTTCTGAATCCAATATGCAAATTAATTAGAGCTGATATTAGTGGACAGATATTTTCCAGCAGAGAGCTGATCCATCTGAAGAATAAGGGCTATATAGACAAATTAGTGAGAGAAGCATATGCAAGGTGGCATGCCTTGGAGGAAATTGATGGAGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACTGTGGAGCAATTTCCAAACAATCATCATCCAGCATCGGTAGTAACATATCAACAGAACAATTATTATGGTGACAAATCTACAGAGGTTGCTAGCTATCTGCCAAGCAATAATGCACAAATAGGAAGCTCTCAGTGGTCACTGAATCCAGCTTATACCACAGCATCATTTGCAAATGGCTTCCCTTATGGCTTCTCAGGATCACAATCAGATGGTGACATAACGCCTTCAGGATCAGGTTCTGTGGATGTTGATGGTGGGGCCACAAGGCAACATTTGTAA 1638 0.4151 MFFVIKSKSYINPFYVLVLHILLMHPHTNNPFNSHSQVPNSSGKMAAKRLFDDSDEDHSDDKPSDKRMRPNRPSFASVIGEVVMVKNLQNLFSALEPLLKRVVSEEVERVMRQCCPLFMTRSPSLRIQAAEQPSTLQLSFNKRLSLPIFTGSRILDIDGNPINITLIDKSNNNNGQGVPTSLPHPIKLEIVVLDGDFPPGDNNELDYWTNEQFNSHIVKERTGKRPLLAGELNLTMRDGIAPIGDIEFTDNSSWIRSRRFRVAVRVTPGSNQGVRIQEGMTEAFVVKDHRVYKKHHPPMLHDHVWRLEKIGKDGAFHRKLSSEGIKTVQDFLKLAVVDTERLRKVSLYLYILGIGMSDKMWEATIKHAMTCEMGSKIYIYRGPQFTIFLNPICKLIRADISGQIFSSRELIHLKNKGYIDKLVREAYARWHALEEIDGVLNDNIALLTQGDQTVEQFPNNHHPASVVTYQQNNYYGDKSTEVASYLPSNNAQIGSSQWSLNPAYTTASFANGFPYGFSGSQSDGDITPSGSGSVDVDGGATRQHL. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05949 545 PANTHER OS02G0177800 PROTEIN 45 511 IPR012416 GO:0005516
Seca9g05949 545 MobiDBLite consensus disorder prediction 53 69 - -
Seca9g05949 545 MobiDBLite consensus disorder prediction 520 545 - -
Seca9g05949 545 MobiDBLite consensus disorder prediction 53 72 - -
Seca9g05949 545 Pfam Calmodulin binding protein-like N-terminal domain 136 289 IPR046831 -
Seca9g05949 545 Pfam Calmodulin binding protein central domain 299 371 IPR046830 -
Seca9g05949 545 Pfam Calmodulin binding protein C-terminal domain 376 436 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05949 Seca-Chr9 173125114 173130917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05949 47 438 Calmodulin-binding Proteins AT5G57580 47.870 2.68e-112 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05949 - - gmx:100792405 674.855