Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05926 ATGATGCTTCAAATCTCCTTCCATTACAACAAACCTCAACTATATATTATTAATATCATCTTCTTCTTGGTTACCACTGTTCTATCTGATAATCCAAAATTTGAGGCTTGCACACCTCGAAGCTGTGGAGCTGGCCCAACCATAAAGTATCCTTTCTGGATTCCTTATGAACAGGAATCATTTTGTGGCTATCCTCACTTTGAGATCACCTGCAGTGACAACAATCCAATTCTCAGAACTTCTAATTATGACCTTTTAGTAAAAGATATCTCTTACTCTAACTCTTCATTTACTGCAGCCAACATTGCTGTCTATGAGGACAAGTGTCCTGCTCCCATGTACAATTACAGCCTTGATCAAACTCCATTTGCCTACAGTTCTGAAAATTCCAATCTCTCTTTCTTCTACAATTGTACCACAGAACCTATTGATTACCCCACTTATGAAGTAAACTGTGCTAAAAATGCTACACATTATTCTTTTGCTGTTTTTCATAAGGAGGCACTGGAGCACAAAAACTACTCCTTGAATGAGTGTCAGTTTATGGTTAATGCCCCATTGAACATGAATGCTGCTGTTAATTTCACTAGCTTGTTGCGAATGAATTACTCTGAGATTTTGAAGATGGGGTTTCTTTTGAATTGGACTGCACCTGATTGCCAGCACTGTGAGAAAAGTGGTGGACGCTGTGGATTTGATGATTATAAGTTCCTCTGCTTCTGCAAGGATAAGTCCTACCTAAAAAGTTGTGGTGATGGCAAAGTGAATTGGGAGAGGAAACTCATTATAGGTGTTGCTTCTGCTGTGTTAGGAGCACTTGCAGTGATCGCTGCCATCTTTTTCTATAGGCGCCGAAAGAATAATTATTCAATATCATATATGCAATCTCGGAGCCTCTCTTCTGATCTATCTTCAAAAGACCCTGAGAAAGGAAGCCAACACTTTGGAGTTGGAGTGCACCTCTTCACTTATACTGAACTTGAAGTTGCCACAAACTACTTTGACCCATCTAAAGAACTAGGAGAAGGGGGCTTTGGGACAGTGTATTATGGAAAACTGCGGGATGGCCGAGGTGTTGCAGTGAAAAGGTTGTATGAGAACAATTATAGGAGAGTTGAGCAATTCATGAATGAAGTTGGGATCCTAACTCGGTTAGTCCATCCAAATCTTGTTTCACTATATGGATGCACTTCTCGCCACAGCCGTGAACTTCTGCTTGTATATGAGTATGTTCCTAATGGAACAGTTGCTGATCATCTTCATGGTAAACAAGCCAAACCTGGAAAACTCCCTTGGCATATTAGAATGAACATTGCTGTGGAGACAGCAAGTGCATTGAAATATCTGCATATCTCTGACATCATCCACAGAGATATAAAAACCAACAACATTCTTCTTGATAATCACTTTCGTGTCAAAGTAGCAGATTTTGGACTTTCACGTCTTTTTCCAGATCATGTTACTCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCAGAGTACCATGAGTGCTACCAGCTTACTAGCAAAAGTGATGTCTATAGCTTTGGAGTTGTTCTGATTGAGCTGATATCTTCCTTGCCTGCTGTTGATATCACAAGGCATAGGCATGAAATCAATTTGGCCAACATGGCTATTAACAAGATTCAGAATCAAGCACTGCATGAGCTTGTGGACAAATCCCTTGGGTTTGACTCAGATTTCAAGGTAAGGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGCTTGCAGAGTTCCAAAGATATGAGACCTTCTATGGATGAAGTGTTGGATACTCTCAAGGATATACAGAGTGATGGAAAATATAAAAGCCAACCTGAGGTAATGGATATCACAAGCTCAGCTGATGATGTTGTGTTGCTGAAGGATGACCCACCTCCACCATCACCGGATTCAAATGTTGTAAGCAAGTCTACAACACCAAATGCTAGCGGATAA 1977 0.4052 MMLQISFHYNKPQLYIINIIFFLVTTVLSDNPKFEACTPRSCGAGPTIKYPFWIPYEQESFCGYPHFEITCSDNNPILRTSNYDLLVKDISYSNSSFTAANIAVYEDKCPAPMYNYSLDQTPFAYSSENSNLSFFYNCTTEPIDYPTYEVNCAKNATHYSFAVFHKEALEHKNYSLNECQFMVNAPLNMNAAVNFTSLLRMNYSEILKMGFLLNWTAPDCQHCEKSGGRCGFDDYKFLCFCKDKSYLKSCGDGKVNWERKLIIGVASAVLGALAVIAAIFFYRRRKNNYSISYMQSRSLSSDLSSKDPEKGSQHFGVGVHLFTYTELEVATNYFDPSKELGEGGFGTVYYGKLRDGRGVAVKRLYENNYRRVEQFMNEVGILTRLVHPNLVSLYGCTSRHSRELLLVYEYVPNGTVADHLHGKQAKPGKLPWHIRMNIAVETASALKYLHISDIIHRDIKTNNILLDNHFRVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHECYQLTSKSDVYSFGVVLIELISSLPAVDITRHRHEINLANMAINKIQNQALHELVDKSLGFDSDFKVRKMINAVAELAFQCLQSSKDMRPSMDEVLDTLKDIQSDGKYKSQPEVMDITSSADDVVLLKDDPPPPSPDSNVVSKSTTPNASG. 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05926 658 Gene3D Phosphorylase Kinase; domain 1 305 410 - -
Seca9g05926 658 ProSiteProfiles Protein kinase domain profile. 334 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05926 658 Gene3D Transferase(Phosphotransferase) domain 1 411 622 - -
Seca9g05926 658 Pfam Protein kinase domain 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05926 658 MobiDBLite consensus disorder prediction 627 658 - -
Seca9g05926 658 SUPERFAMILY Protein kinase-like (PK-like) 317 632 IPR011009 -
Seca9g05926 658 SMART serkin_6 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05926 658 FunFam Wall-associated receptor kinase-like 20 411 619 - -
Seca9g05926 658 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Seca9g05926 658 Pfam Wall-associated receptor kinase C-terminal 152 244 IPR032872 -
Seca9g05926 658 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 654 IPR044652 GO:0004672
Seca9g05926 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Seca9g05926 658 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05926 Seca-Chr9 172867196 172872198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05926 219 658 Receptor kinase-like Gene Family AT1G25390 54.167 5.41e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca9g05926 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05926 - - qsu:112024175 804.668