Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05915 ATGGGGTGGGATCTCTTTGAGTGCTGCTTCACTAGAACTTCTTCTAACACATTTTCAAATCACAGTAAGTTGAAGTGGCAAATCTTCCCCTATAGGCAACTTACAAAAGCCACAAAAAATTTTCATGAATGTCATCTTCTTGAAAAGAGAGGCTTAGCCATAGTATATTATGCTTTCAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAATCATTTTGACACTTTCCTTGGAAAGGGAGGGTTTGGCACAGTCTACTATGGAAAACTTAAAGATGGGCGAGAGGTTGCAATAAAACGTTTCTATGGGGAGACAGACAAAACCATTAAGCAATTCATGAAAGAAATTGAGATCTTATGTCTCTTGCAACATCAAAATCTGGTTTCACTCTATGGCTGTAGTTCTCGTCATAGCGACAAATACATGCTAGTGTATGAGTACATCTCCAATGGCACTCTTTCTGAGCATCTTCGTGAATCTTCTTGTGGTAAACTAGCATGGCCTACTAGACTGAATATTGCCATTGAAACTGCAACTGCCTTGGTATACCTTCATGACTCAGGGATCATCCACCGTGACATAAAAGGGAGCAACATTCTGTTGGATGAAAATTTTACAGTCAAAGTGGCAGATTTTGGACTCTCACGGTTTCTTCCAGATTATGTTACTCACGTTTCAACTATTGCAGTTGGAACTCGTGCTTACATAGATCCAGACTATTATTTATCTGGAAGGTGGTTGCGGAGCACTAACTGTAGTAGTGACCTTATGACGTTGGGGTGTGATATGTTGCAATGCTTCTTCACTAGCACTTCTTCTGATTCTGATACATTTCCAGAGAATGAGGATGGCGTTGAGTTAAAGTGGAAAATCTTTGCCTATAATGAACTTGCCAAAGCCACAAACAATTTTGATCCACGCAATTGTTGTGGATGGGGAGACAAGGCCACAGTATATTATGGCAAACTTGACAATGGTTGTGAGATTGCAATCCAACACTTTCATGAAGAAAAGCACCAAACTTTTCAAAAGTTCATCAAGGAAACTTTGATCCTAAATTACTTGCCCCATAAAAATCTTGTGACAATTTATGGGCGATCCTCTGATGAAGAACCAATGCTAGTACATGAATACCTCTCCAATGGCACTCTTGCTGGTCGTCTTCAAGGTGACATAGCAGAAAGCAACATGGTACCTTGGCTTACCAGATTGAATATTGCCATTGATATTGCAAATGCATTGGACTATCTTCATGGTTATGGCATCATCCACTCTGATGTAAAGTCCAGCAATATTCTCCTAGATAAGAATTTTTGTGCTAAAGTTTCTAACTTTCTGTTATCACAGAAACTTCAAGAGGGAGTTTCTGCTAATGCTACACATGTTACAAGTGATATAACAGGAATATTTGGTTATATAGATCCAGAGTATGAGCAATATGGCTGTCTTAGTGTGAAAAATGATGTTTATAGCTTTGGGGTGGTATTTTTTGAGCTTATATCATCAAAGCTTGTTAAACATTGGGAAGGGGGTGGTGGTGGTGATAGTCTTGCTACTATGTTAAGCAGAAAAATCCAAAACCAATCACTGGAGGAGCTAGTGGATCCAAGACTTGGCTTCCATTCAGATCCTATCATCAAGAAGATGATAACTGATGTAGCTGAGCTTGCTAGTCGGTGCTTGAAATCTCCACAAGAACTAAGGCCATACATGGGACAGGTACTAGAGACTCTTCATTACATAAGACAAGAGGGAAATGAAAAAAAACCCAAAAAAGGTTTCAAATTCTTCAACCTTGCTGAACTTGAAGAAGCCACTAAAGGTTTTAAGACTTGTCTTGGAAAGGGTGGGTTTGGCACTGTATATTATGAGACTGACAAGACCCCTAAGCAATTCAAGAATGAAATTGACATGTTAAGTGATTTGTGCCATCAAAACCTGGTTTCACTCTATGGATGCAGTCCCCTAGACAGCAAAGAACACCTTCTAGTATATGAGTATGTCTCATGTGGCTCTCTTTCAAAGCATCTAAATGGATCTTCTAGCACCAAACTACCATGGCTTACTAGATTGAACATAGCCATTGAAACTGCAACTGCATTGGTGTATCTTCACAATTCAGGTATCATCCACCGTGATGTAAAAGCTAGCAATATTCTCTTGGATGAGAATTTGATGGTTAAAGTTGCAGATTTTGGACTCTCAAGATATTTTCCAGATTTTGTTACCCATGTTTCAACCCTTCCAGTAGGAACTCTTGCTTATATAGATCCTGAATATTATCAATCAGGCAGGGTTAGTGACAGAAGTGATGTGTATAGCTTTGGGGTGGTTTTGTTTCAGCTTATATCATCTAAGCCTCCAAATGTCACGGAAGGCACAGATAGTGCCCTTATGAGATTGGGGTGTGATCTGTTGCAATGCTGCTTCACTAGCACTTCTTCTGATACAATTCCAGAGGATGGTATTATTCAGATGAAGTGGCAAATCTTCCCCTATAGTGAACTTGCCAGAGCCACAAACAATTTTGATCAATGTAATTGTTGTGGATGGGGTGACATGGCCAAAGTATATTATGGCAAACTTGACAATGGGTGTGAGATTGCAATCCAATGTTTTAATGAAGAAAAGCACCAAATATTTCAACAGTTCATCAATGAAACTGTGATCCTAAATTACTTGCCCCATAAAAATCTAGTCTCAATTTATGGATGTGCCTCTGATGAGGAACCCATGCTAGTACATGAATACCTCTCTAATGGCACTCTTGCTGGTCGTCTTCAATGTGACATAGATGAAAGCAGCATGGTACCTTGGTATACCCGATTGGATATTGCCATTGATACTGCAAATGCTTTGGACTATCTTCACTATAATGGCATCATCCACTCTGATGTAAAGTCCAGCAATATTCTTCTAGATAAAAACTTCTGTGCTAAAGTTTCTAACTTTCTATTGTCAATGAAACTTCCAGAGGGAGTTTCTGCCAATGCTAGACATGTTACAACTGATATAATAGGAACATGTGGTTGTATAGATCCAGAGCATGAGCAATATGGCTGTCTTAGTGTGAAAAATGATGTTTACAGCTTTGGGGTCGTATTGTTTGAGCTTATATCATCAAAACTTGTTAAATATTGGGAAGGGAGTGATGGTTTCAAATTCTTTGGCCTAGCTGAACTTGATGAAGCCACTGAAGGTTTTAAGACTTGTCTTGGAAAGGGTGGGTTTGGCACTGTATATTATGGAAAACTTAGAGATGGCCGTGAGGTTGCAATTAAACGTTTCCATGAAGAGACAGACAAGACTGTTAAGCATTTCATGAATGAAATTGACATCCTAAGTGACTTGTGCCATCAAAACCTTGTTTCACTCTATGGCTGCAGTCCCCAAGACAGCAATGAACACCTTCTAGCGTATGAGTATGTCTCATGTGGCACTCTTTCTTTTCATCTTCATGGATCTTCTGGCACCAAACTTCAATGGTTTACTAGATTGAATATTGCCATTGAAACTGCAACTGCATTGGTATATCTTCATGATTCCGGTATCATCCACCGTGATGTAAAAGCAAGCAACATTCTCTTGGATGAGAGTTTCATGGTTAAAGTTGCAGATTTTGGACTCTCACGGTATTTTCCAGACATTGTTACTCATATTTCAACCATTCCAGTAGGTACTCGTCCTTACATAGATCCAGAATACTATAGATATGGAAGGGTTTGTGACAGAAGTGATGTCTATAGCTTTGGGGTGGTCTTGTTTCAGCTTATATCATCCAATCCCCCAAGTGTCATGAAGGGCACAGAGTGTGTTACTCCTCTTGCTCTCTTTGCAATGAATAAAATCTTAAACAAGGCATTGGAGGAGCTAGTGGATCCAAATCTTGGGTTTGATTCAGACAAAAACATTATGGAAACAATAACAGCAGTGGCAGAGTTAGCATTTCAATGCGTGCAGTGTCCCAAGGAATTCAGGCCATCCATGAAACAAGTGCTAGAGACACTGGAGGGCATAAAGAAAGGGATATGGTTATTCAACCAGCTAACATAG 4056 0.3952 MGWDLFECCFTRTSSNTFSNHSKLKWQIFPYRQLTKATKNFHECHLLEKRGLAIVYYAFKIFHHAELEEATNHFDTFLGKGGFGTVYYGKLKDGREVAIKRFYGETDKTIKQFMKEIEILCLLQHQNLVSLYGCSSRHSDKYMLVYEYISNGTLSEHLRESSCGKLAWPTRLNIAIETATALVYLHDSGIIHRDIKGSNILLDENFTVKVADFGLSRFLPDYVTHVSTIAVGTRAYIDPDYYLSGRWLRSTNCSSDLMTLGCDMLQCFFTSTSSDSDTFPENEDGVELKWKIFAYNELAKATNNFDPRNCCGWGDKATVYYGKLDNGCEIAIQHFHEEKHQTFQKFIKETLILNYLPHKNLVTIYGRSSDEEPMLVHEYLSNGTLAGRLQGDIAESNMVPWLTRLNIAIDIANALDYLHGYGIIHSDVKSSNILLDKNFCAKVSNFLLSQKLQEGVSANATHVTSDITGIFGYIDPEYEQYGCLSVKNDVYSFGVVFFELISSKLVKHWEGGGGGDSLATMLSRKIQNQSLEELVDPRLGFHSDPIIKKMITDVAELASRCLKSPQELRPYMGQVLETLHYIRQEGNEKKPKKGFKFFNLAELEEATKGFKTCLGKGGFGTVYYETDKTPKQFKNEIDMLSDLCHQNLVSLYGCSPLDSKEHLLVYEYVSCGSLSKHLNGSSSTKLPWLTRLNIAIETATALVYLHNSGIIHRDVKASNILLDENLMVKVADFGLSRYFPDFVTHVSTLPVGTLAYIDPEYYQSGRVSDRSDVYSFGVVLFQLISSKPPNVTEGTDSALMRLGCDLLQCCFTSTSSDTIPEDGIIQMKWQIFPYSELARATNNFDQCNCCGWGDMAKVYYGKLDNGCEIAIQCFNEEKHQIFQQFINETVILNYLPHKNLVSIYGCASDEEPMLVHEYLSNGTLAGRLQCDIDESSMVPWYTRLDIAIDTANALDYLHYNGIIHSDVKSSNILLDKNFCAKVSNFLLSMKLPEGVSANARHVTTDIIGTCGCIDPEHEQYGCLSVKNDVYSFGVVLFELISSKLVKYWEGSDGFKFFGLAELDEATEGFKTCLGKGGFGTVYYGKLRDGREVAIKRFHEETDKTVKHFMNEIDILSDLCHQNLVSLYGCSPQDSNEHLLAYEYVSCGTLSFHLHGSSGTKLQWFTRLNIAIETATALVYLHDSGIIHRDVKASNILLDESFMVKVADFGLSRYFPDIVTHISTIPVGTRPYIDPEYYRYGRVCDRSDVYSFGVVLFQLISSNPPSVMKGTECVTPLALFAMNKILNKALEELVDPNLGFDSDKNIMETITAVAELAFQCVQCPKEFRPSMKQVLETLEGIKKGIWLFNQLT. 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05915 1351 SUPERFAMILY Protein kinase-like (PK-like) 1054 1342 IPR011009 -
Seca9g05915 1351 ProSiteProfiles Protein kinase domain profile. 1067 1346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 ProSiteProfiles Protein kinase domain profile. 72 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 SUPERFAMILY Protein kinase-like (PK-like) 593 800 IPR011009 -
Seca9g05915 1351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Seca9g05915 1351 SUPERFAMILY Protein kinase-like (PK-like) 55 269 IPR011009 -
Seca9g05915 1351 SUPERFAMILY Protein kinase-like (PK-like) 829 1043 IPR011009 -
Seca9g05915 1351 ProSitePatterns Protein kinases ATP-binding region signature. 1073 1095 IPR017441 GO:0005524
Seca9g05915 1351 Pfam Protein kinase domain 76 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 Gene3D Transferase(Phosphotransferase) domain 1 59 288 - -
Seca9g05915 1351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Seca9g05915 1351 Pfam Protein tyrosine and serine/threonine kinase 851 1043 IPR001245 GO:0004672|GO:0006468
Seca9g05915 1351 Pfam Protein tyrosine and serine/threonine kinase 627 787 IPR001245 GO:0004672|GO:0006468
Seca9g05915 1351 Pfam Protein tyrosine and serine/threonine kinase 312 579 IPR001245 GO:0004672|GO:0006468
Seca9g05915 1351 Pfam Protein tyrosine and serine/threonine kinase 1070 1337 IPR001245 GO:0004672|GO:0006468
Seca9g05915 1351 Gene3D Transferase(Phosphotransferase) domain 1 380 600 - -
Seca9g05915 1351 Gene3D Transferase(Phosphotransferase) domain 1 1145 1344 - -
Seca9g05915 1351 SUPERFAMILY Protein kinase-like (PK-like) 290 584 IPR011009 -
Seca9g05915 1351 Gene3D Transferase(Phosphotransferase) domain 1 601 817 - -
Seca9g05915 1351 Gene3D Phosphorylase Kinase; domain 1 818 918 - -
Seca9g05915 1351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Seca9g05915 1351 Gene3D Phosphorylase Kinase; domain 1 1059 1143 - -
Seca9g05915 1351 FunFam Lectin-domain containing receptor kinase A4.3 1144 1349 - -
Seca9g05915 1351 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Seca9g05915 1351 Gene3D Phosphorylase Kinase; domain 1 289 379 - -
Seca9g05915 1351 ProSiteProfiles Protein kinase domain profile. 608 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 SMART serkin_6 608 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 SMART serkin_6 305 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 SMART serkin_6 1067 1346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 SMART serkin_6 72 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05915 1351 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1053 1343 IPR044652 GO:0004672
Seca9g05915 1351 Gene3D Transferase(Phosphotransferase) domain 1 919 1058 - -
Seca9g05915 1351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1185 1197 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05915 Seca-Chr9 172774632 172787467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05915 597 788 Receptor kinase-like Gene Family AT1G25390 53.521 3.62e-57 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca9g05915 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05915 - - gmx:100801413 640.188