Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05879 ATGGATCCACCACCCCTCTCCGCCGCCACCGCCGCCACCATGGCTCCAACTACCATCCAACAAAACCACCCTGACTCAATAGAGACCTCATCACCAAAACATTTTAGAAATGGTGAAACAATGAATGATGAAGCTCTCCCTGCTGTCCCTGGTGCCAAGCTTCGTCTCATGTGCAGCTATGGCGGCCATATCATGCCACGTCCTCATGACAAGTCCCTCTGTTATGTCGGCGGCGACACCCGAATCGTGGTGGTGGATCGCCATTCCTCTCTGAAAGACCTCTGTTCTCGCCTTTCTCGCACTATCCTCCATGGAAGACCATTCACTCTCAAGTATCAGTTACCCAATGAAGACCTTGATAATCTCATCACTGTTACCACTGATGAAGATCTTGATAACATGATTGAAGAGTATGATCGTATAGCAGCTGCAGCATCTCCTTTGAAACCTTCACCTTCACGCCTCAGGGTGTTTCTGTTTTTCACAAAACCAGAGTCCTCTGTTTCAATGGGGTCACTCCTTGATGATGCTAAGTCAGAGACATGGTTCGTGGATGCACTTAACAACTCAGGGATTCTATCAAGGGGTGTGTCAGATTCTGTTGCAACTGATTGTTTTGTGAATCTTGATGGTGTTCCTGCTAGTGGTTCAAGCAATAACTTGGAGGCTCAGGGTGGAGCAGAGTCTTTGACTCTGCTTGAAAATAACAAGGTTAAGAATGTTGCTGATGTTGTGCATTCAACACCTGGTTCACCAATGTTGGAGAATAGTTCTTCTTCTTCTTCATCATCATCTCCTTCTATGGCTAATTTACCTCCAATTAGAGTTCGTGTTGATGAAAATGGTGGTAGCAGGCTTCAACAAGAGAAGAGGGTTGGGGTGATGGAGGAGCAGTTTGCTCAAATGACCTTTGCTGCAAGTGGGGTGAAGGCTGATGATGGGTTTGTTGTTTCTTCTGCTGTGGCTATGCCTGCAATTCCTGCAGCTGTGACTATGGCATCAGCTGGGGTTGTTACTACTAGTGATAATGTGAATAGGGTTGTTTCTGATGATGAGAGATCAGATCATGGAGCACCTATTGGGTCTAGGAAGCCTCCTTTACCATTGCAGCTTGTGCAACCAAGGAATAGTGGTGGTTTGAGTTTGCCTTCTCCAGATTCAGTTGCTAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCCAAGACTGTTTACTATAATCAAGAACAAGTCCAAGCTGCACATTTGGACAACAAAGCTCTTGCTATGCAAAATGCCAAGAGTGAAGTATCTGATCATGTCACTGGACTACAAAGGGAACAAGTTCAGGATCCTGGTTACACATTACCCCAACAATTGGATCAAAATCAGCAACTCCAGCAGCCATATGTTCATTCCAGCACTCACTACATCCACCACCCTGCAGCCACAGGTCAAGTGCCAGTGTCATCCTACTACCAAGTTTATGCCCCACCATCACAGCAACAACTTCACCATCCAATTAGTCAGCAGCAATACCCAGTTTATGTAATGCCTGTGGGACCTACACAACCATACAACATGGCATTGCAACCCAATATAGCTGACCCTAATGTGGTAGCCTCAGGTAGGCCACTAATACCCCAAAGTGTTGCTGCCTCAACAGCATATAAGGATGGCACCCCACCTATTTACCCCACTAAGTCAGCTACCCCTCCTGTGGCATCAAATCCTGCATTTGTTCAAGTGCCTTCCAATCAGTTTCAGCAACAATATGTGGGTTTGCCTCAATACCATCATCCTCCACAGCCCATTGCTGTAGCTCCCCAAGGTGCTACTAATTATGGTTATGAATATGGTGGTCCAGTGCAAGACCAACCATACTACACACAACAACAAACTAGTGCTCCATTGCTTCCTCAATACCAATCCATGACCCCAGCAGCAGCTGCTGCAGCACTATCTGATGCTTCAAAACAATTTCCTGCAGACAATATTCAGCAGCCAAATAGAACTACACAGCCAGTATAA 2010 0.4592 MDPPPLSAATAATMAPTTIQQNHPDSIETSSPKHFRNGETMNDEALPAVPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRHSSLKDLCSRLSRTILHGRPFTLKYQLPNEDLDNLITVTTDEDLDNMIEEYDRIAAAASPLKPSPSRLRVFLFFTKPESSVSMGSLLDDAKSETWFVDALNNSGILSRGVSDSVATDCFVNLDGVPASGSSNNLEAQGGAESLTLLENNKVKNVADVVHSTPGSPMLENSSSSSSSSSPSMANLPPIRVRVDENGGSRLQQEKRVGVMEEQFAQMTFAASGVKADDGFVVSSAVAMPAIPAAVTMASAGVVTTSDNVNRVVSDDERSDHGAPIGSRKPPLPLQLVQPRNSGGLSLPSPDSVASDSSIASANSFSKTVYYNQEQVQAAHLDNKALAMQNAKSEVSDHVTGLQREQVQDPGYTLPQQLDQNQQLQQPYVHSSTHYIHHPAATGQVPVSSYYQVYAPPSQQQLHHPISQQQYPVYVMPVGPTQPYNMALQPNIADPNVVASGRPLIPQSVAASTAYKDGTPPIYPTKSATPPVASNPAFVQVPSNQFQQQYVGLPQYHHPPQPIAVAPQGATNYGYEYGGPVQDQPYYTQQQTSAPLLPQYQSMTPAAAAAALSDASKQFPADNIQQPNRTTQPV. 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05879 669 MobiDBLite consensus disorder prediction 246 272 - -
Seca9g05879 669 PANTHER OS05G0427100 PROTEIN-RELATED 25 547 - -
Seca9g05879 669 SUPERFAMILY CAD & PB1 domains 69 171 - -
Seca9g05879 669 SMART PB1_new 68 160 IPR000270 GO:0005515
Seca9g05879 669 MobiDBLite consensus disorder prediction 374 392 - -
Seca9g05879 669 MobiDBLite consensus disorder prediction 640 669 - -
Seca9g05879 669 MobiDBLite consensus disorder prediction 11 28 - -
Seca9g05879 669 Gene3D - 73 161 - -
Seca9g05879 669 CDD PB1_UP2 57 160 - -
Seca9g05879 669 Pfam PB1 domain 69 160 IPR000270 GO:0005515
Seca9g05879 669 MobiDBLite consensus disorder prediction 250 270 - -
Seca9g05879 669 MobiDBLite consensus disorder prediction 1 43 - -
Seca9g05879 669 ProSiteProfiles PB1 domain profile. 53 160 IPR000270 GO:0005515
Seca9g05879 669 MobiDBLite consensus disorder prediction 653 669 - -
Seca9g05879 669 MobiDBLite consensus disorder prediction 349 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05879 Seca-Chr9 172302174 172304984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05879 53 189 MAP Kinase Kinase Kinase AT5G57610 43.165 1.12e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05879 - - var:108343763 882.863