Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05845 ATGGATAAATCTGAAACTGCTTCAATGATTAAAGAGGAAGATTATATAGATCCTATATTTGATTCTGGGTGTGATGGTAGTGTTAGTGTTAGTGTGGAGGGTAGTGAAGTGTGTGAAAAGAATCAAAAAGTTGACATTGATGTTGGAGAAGGTCAGTTTAGAAAGATTTTTGACCTAACTGCTGATGAATTTCGCTGCCTTGAGTTTGGCAATGAAGAAGAAGTCTATCATTATTATAAGTTATATGCAAAATTTCATGGATTTGTGGTTAGAAAAGATGATGTAACAAAGGATATTAGGGGTAATATTATTATGCGTCAGTTTGTTTGCAATAGGGAGGGTTTAAGGAAGAAGAAGCACCTTATGAGGGTGGATAGGAAGAGAGAGCATAGGCCACTTACCCGTACAAACTGCCAAGCTAAGCTTCGTATACACTACGATTACAAGATTTTTAAATGGATAGTTGTGTCCTTTGAGGAATGTCATAACCATGAACTTACCCCACCAAGATATGTTCACTTACATTCTGCTTATCGTAGTTTGACAGATGGGGATAAGGCCCAGGTTGACATTTTGCATTCATATGGTGTTAGAAGTTGTCACATCATGGGCTACCTAGTAGCTCAGAAAGGGGGATATGGTCGAGTTGGTTTTACAAAGAAGGACATGTACAATTATCTTGACCGTAAAAATCAAGCAAAGATTAAGGAAGGGGATGTACGTGCTGGTTTGAGTTATCTACAGGGTAAGGCAGACAGTGATCCCTTGTTGTATGGGAAGTACTCAACTAGTTCTGATGGAAAATTGAAGCATCTTTTTTGGGCAGATGGAGGATGTAGGTGTGATTATCAATGCTTTGGTGATGTTCTTGCTTTTGATACCACTTACAAGAAGAACAAGTACAATTATCATGTTGTTATATTCTCTGGATGCAATCACCATTCTCAAACTGTAATTTTTGGATGTGCTTTGGTTTCAGATGAAACAACTGAAACTTATAAGTGGGTTTTAGAAGCTTTTTTGGAAGCAATGGAAAAGAGACAACCAAAAGTAGTTATAACAAATGGTGATGCTGCAATGAGGGAAGCGATAAAACAAGTGTTTCCAGAATCATGTCATCGATTGTGTGCATGGCACCTACATAATAATGCCTGTGATAATGTGAAAAATTATGCGTTCTTGCAGGATTTCAAGACAACAATGTACTCCAATTTCAAGTCAGATGAATTTGAGGAGTATTGGAAGAAAATTGTTGATGAACATGGTTTCAACAAACAAATGGGTGTTAAAAACTTATGA 1299 0.3711 MDKSETASMIKEEDYIDPIFDSGCDGSVSVSVEGSEVCEKNQKVDIDVGEGQFRKIFDLTADEFRCLEFGNEEEVYHYYKLYAKFHGFVVRKDDVTKDIRGNIIMRQFVCNREGLRKKKHLMRVDRKREHRPLTRTNCQAKLRIHYDYKIFKWIVVSFEECHNHELTPPRYVHLHSAYRSLTDGDKAQVDILHSYGVRSCHIMGYLVAQKGGYGRVGFTKKDMYNYLDRKNQAKIKEGDVRAGLSYLQGKADSDPLLYGKYSTSSDGKLKHLFWADGGCRCDYQCFGDVLAFDTTYKKNKYNYHVVIFSGCNHHSQTVIFGCALVSDETTETYKWVLEAFLEAMEKRQPKVVITNGDAAMREAIKQVFPESCHRLCAWHLHNNACDNVKNYAFLQDFKTTMYSNFKSDEFEEYWKKIVDEHGFNKQMGVKNL. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05845 432 Pfam MULE transposase domain 289 383 IPR018289 -
Seca9g05845 432 PANTHER OS01G0519700 PROTEIN 67 425 - -
Seca9g05845 432 Pfam FAR1 DNA-binding domain 78 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05845 Seca-Chr9 171518467 171520353 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05845 MULE 3.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05845 - - ccaj:109792835 567