Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05844 ATGAACGAAAGCGCACAGACCCACAAGCGTGAAGCTGATTCAGAAAACAAAGAGGATATTGTTGCGTCGAAGAAATCGAGGGTCGAATCTTCCGAAGTTGGTTTGGAAGAGAATGCTGCAAAGGAAGTATCTTTCCACATTGAAGCGGATGCCGCTGAGGATAAAGGTTCGAGGCATACCATGGAAGATGCATGGGTGGTGCTTCTCGACGCATCCCTAGATTACCCTGGAAATTTGAGATGTGCACATTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCGGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTATCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGACAGCTAAAAGATCTATACTTGATGGTTTTCGTAAAACTGATGAGTCCCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGAGACAAAAAGTTTTTGTTGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACAATAACTGATGGATCCCAAGATAACTCAAATGGAGTCCATGCGCTGAAGGCCATTGTATTGACGAGAGAACACAAACCTATCTTCCCACAGGAGCGTGCACGCATTCAGAAGGCCGGTGGTGTTGTGAGCTCAAATGGACGACTACAAGGGCGTCTAGAAATTTCTCGGGCCTTTGGAGATCGCCAGTTCAAAAAGGTGGGTGTTACTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAGAGATCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTCGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTACCTGTTACAGCTGTGAGCCGTCGTCTTGTAAAGGAAGCTGTTCGTGAGCGTCGCTGCAAAGATAACTGCACTGCAATTGTCATTGTATTCAAAAGGAGCATTGCCACTATCTTTGTAATCAGGAACCAAAGACCACCCCTAACTGTATCTTTACTGGTTCAGTTCTTCCTATTAGCATTACTGGGGATCACTGCAAACCAAGGCTTTTACTTGTTGGGATTGTATTATGCTTCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCTATCACTTTTGTCTTGGCCTCAGCTTTAAGACTTGAGGAAGCCAACCTTGCAAGGAGAGATGGATTGGCAAAAGTTCTAGGAACCATTGCAAGTGTAGGGGGTGCCACTATAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACCAGCAGACAGACCAAACACATGGAGACACCTTAAAAGTAGACCATTCTTCAACAAAAGTGCAAAATTGGACATGGGGTTGCATATACTTGCTTGGACATTGTTTATCATGGGCTGGCTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAATATCCAGCAAAACTAACACTCACTTCATTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCTGCCTTCACAGAAAATGATCTTGAGAAGTGGAAGATAATATCAGCAGAGGAGCTTTTCACCATCCTATATGCTGGAATTGTATCATCTGGCATTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTCTTTCAGCCCATACAAACTTTTCTAGTTGCTGTCATGGCAGCCTTAATTCTTGGAGATCAATTATACTCTGGAGGGGTTATTGGTGCACTTCTCATCGTGATAGGTCTATACTTAGTCCTATGGGGCAAAACCAACGAAAAGAAAGTGACTGAACCATCATTAACAGAGCCCTTGCTTAATGAAAAGGAAGAGAATAAAGTTGCTGATGCAACTCCTAAAGATATACCTTGA 1893 0.4332 MNESAQTHKREADSENKEDIVASKKSRVESSEVGLEENAAKEVSFHIEADAAEDKGSRHTMEDAWVVLLDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHENVLSAGLPRELLDVKTAKRSILDGFRKTDESLLQESAEGGWQDGATAVCVWVLRQKVFVANVGDAKAVLARSTITDGSQDNSNGVHALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEISRAFGDRQFKKVGVTATPDIHSFDLTDRDHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVTAVSRRLVKEAVRERRCKDNCTAIVIVFKRSIATIFVIRNQRPPLTVSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVLASALRLEEANLARRDGLAKVLGTIASVGGATIITLYKGPPLLHQQTDQTHGDTLKVDHSSTKVQNWTWGCIYLLGHCLSWAGWMVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFTENDLEKWKIISAEELFTILYAGIVSSGIVISLQTWCIQKGGPVFVAVFQPIQTFLVAVMAALILGDQLYSGGVIGALLIVIGLYLVLWGKTNEKKVTEPSLTEPLLNEKEENKVADATPKDIP. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05844 630 SUPERFAMILY Multidrug resistance efflux transporter EmrE 336 424 - -
Seca9g05844 630 PANTHER WAT1-RELATED PROTEIN 317 607 IPR030184 GO:0016020|GO:0022857
Seca9g05844 630 SUPERFAMILY PP2C-like 45 323 IPR036457 -
Seca9g05844 630 MobiDBLite consensus disorder prediction 611 630 - -
Seca9g05844 630 SUPERFAMILY Multidrug resistance efflux transporter EmrE 514 598 - -
Seca9g05844 630 Pfam Protein phosphatase 2C 52 310 IPR001932 -
Seca9g05844 630 CDD PP2Cc 52 322 IPR001932 -
Seca9g05844 630 ProSiteProfiles PPM-type phosphatase domain profile. 48 322 IPR001932 -
Seca9g05844 630 Pfam EamA-like transporter family 456 594 IPR000620 GO:0016020
Seca9g05844 630 FunFam Probable protein phosphatase 2C 67 36 324 - -
Seca9g05844 630 MobiDBLite consensus disorder prediction 606 630 - -
Seca9g05844 630 Gene3D - 31 325 IPR036457 -
Seca9g05844 630 SMART PP2C_4 44 320 IPR001932 -
Seca9g05844 630 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05844 Seca-Chr9 171501329 171514167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05844 330 624 Nodulin-like Gene Family AT3G18200 63.907 1.70e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05844 K17500 - vum:124833018 509.605