Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05826 ATGAATGAAGATGAAGTTAATAGTGAAGATGGGTCCGAAGATGGTGAAGAAGAACATACAGAAAGTACTGGATTTGGCTCAAACGACAAAGATAATGAGATGAATAATAGTGAAGGTGAAGGGGAGTCTAGTGATGAAGATGGTGAACATGATTCCAATGATAGGAATGACATTCCCATTGAAAGTGAAGAGGAATTTGGAAATATTGACTTCATGAGCTTAACATCGAGTGATCTAATGAAGTACCACTTTCCTGATCGTGAGGTTGCTTTCGATTTCTATAGTTGGTATGCAAGATTCCATGGCTTTGCCGCTCGGAAGGACAGGACAGTGCATGATAAGAAGGATGAAGTAATTCAACAAACTTTTATTTGCTACAGGGAAGGTGGAAAAATACCCAACCAAAGACCTTTGAAGCGTGCCCCTAGGAAGAAAACGAGGTGTGGATGCCTAACTAGTTGTCAAGTGCACATATGGTCTGCCAATAACCGGTGGTATTTTAAAAAATTGTTAGAAGAACATAATCATATGTTGTTGGAAGAAAAGTATGTCGGGCTCCTGGCTTCTCATAGGAAGATGAGTGAAGATGATGTAGTCCAAATGATGAACATGCAAAAGGTGGGGATTAGGACTCCACACATATATGGTTCGTTTGCTAGCCAAATGGGAGGATATGAAAATGTTAGATTCAGGAAAAAGGACATATACAATGAAGTAGACAAGCTTAGGCGGAAGAAAGGGTCAGATGCGACAACTGCTTTGTCATACTTACAACGTTTGAAAAGGACTGATCAAGCATTGTATTGGAGGCACACTTCTGATGAGCATGGTAGGCTACAACACCTTTTTTGGTTTGATGGACGATGCTAA 870 0.4023 MNEDEVNSEDGSEDGEEEHTESTGFGSNDKDNEMNNSEGEGESSDEDGEHDSNDRNDIPIESEEEFGNIDFMSLTSSDLMKYHFPDREVAFDFYSWYARFHGFAARKDRTVHDKKDEVIQQTFICYREGGKIPNQRPLKRAPRKKTRCGCLTSCQVHIWSANNRWYFKKLLEEHNHMLLEEKYVGLLASHRKMSEDDVVQMMNMQKVGIRTPHIYGSFASQMGGYENVRFRKKDIYNEVDKLRRKKGSDATTALSYLQRLKRTDQALYWRHTSDEHGRLQHLFWFDGRC. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05826 289 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 249 - -
Seca9g05826 289 MobiDBLite consensus disorder prediction 1 17 - -
Seca9g05826 289 MobiDBLite consensus disorder prediction 48 62 - -
Seca9g05826 289 Pfam FAR1 DNA-binding domain 92 179 IPR004330 -
Seca9g05826 289 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05826 Seca-Chr9 171011169 171012038 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05826 FAR1 3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05826 - - tpra:123915148 256.914