Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05808 ATGGGTGGTGGAGGAACTCTCGCGGATGGCATTCGTCGATTATTCCATCGTCGCTCTCCTATTAACTCTCACGTAATTGATCATCACAACAACGACGACGACGCTGTTGGATGCAATGCTAATAACAACGTTAACAATGCCAACGTTAACAACAACAAGAACATTAACTCTTCTTCTTCCTTGAATCTTCTCAAAGTACCTACACGCTCCAATTTAATACCTTCTTCCATGGATCGTAACAAAAAGGGTGCACCAGAGGCAGAGTTTTTTACTGAGTATGGAGAGGCAAATAGGTACCAGATCCATGAAGTGGTTGGAAAAGGAAGTTATGGTGTTGTGGTTTCTGCAGTTGACACTCATACTGGGGAAAAAGTTGCTATTAAGAAAATCAATGATGTTTTTGAGCATGTATCGGATGCCACAAGGATCCTAAGAGAAATTAAACTCCTCCGTTTACTCCGACATCCTGATATAGTAGAAATTAAGCACATAATGTTTCCTCCTTCACGAAGAGAGTTCAGAGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGATCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAACACTACCAATTTTTCTTGTACCAGCTTCTTCGGGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGTTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGCAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTCCTGCTGAATCTATTTCGAGGATTAGAAATGAGAAGGCTAGAAGATACCTTAGTAGTATGCGAAAAAAGCAACCAGTTCCATTCTCCAAAAAATTTCCAAATGCAGATCCATTGGCTCTTCATTTGCTGGAGCGATTACTAGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCACTATCTGAGCCTTACTTTCATGGTTTGTCAAGTGTGGACCGTGAACCATCCACTCAACCCATTTCAAAACTAGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAGATGCTCCAAGAATATCTTCAGGGTGGAGAACAAACAAGCTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCATTGCTGAGACAACATGCCTCCTTACCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAGAACAATCAAAACAATGATTTTGAACAGCCAACTGGATCAAATCTTCAAAGTCCAGGGTCTGACGTGACACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAATGTATAGATGTGAAAAAAAGTAAAGATCCAGTGGTATTTAACTCTCTTTCAAGTTTCAAGTGCTGTCCTTGTGTTGGGTAA 1680 0.4083 MGGGGTLADGIRRLFHRRSPINSHVIDHHNNDDDAVGCNANNNVNNANVNNNKNINSSSSLNLLKVPTRSNLIPSSMDRNKKGAPEAEFFTEYGEANRYQIHEVVGKGSYGVVVSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMFPPSRREFRDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFSKKFPNADPLALHLLERLLAFDPKDRPTAEEALSEPYFHGLSSVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRQHASLPRERVPAPKDENNQNNDFEQPTGSNLQSPGSDVTRSLLKSASISGSKCIDVKKSKDPVVFNSLSSFKCCPCVG. 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05808 559 MobiDBLite consensus disorder prediction 497 519 - -
Seca9g05808 559 Gene3D Phosphorylase Kinase; domain 1 115 436 - -
Seca9g05808 559 ProSitePatterns Protein kinases ATP-binding region signature. 105 129 IPR017441 GO:0005524
Seca9g05808 559 SMART serkin_6 99 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05808 559 CDD STKc_TDY_MAPK 98 435 - -
Seca9g05808 559 Pfam Protein kinase domain 99 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05808 559 SUPERFAMILY Protein kinase-like (PK-like) 93 394 IPR011009 -
Seca9g05808 559 ProSitePatterns MAP kinase signature. 134 237 IPR003527 GO:0004707|GO:0005524|GO:0006468
Seca9g05808 559 MobiDBLite consensus disorder prediction 470 519 - -
Seca9g05808 559 FunFam Mitogen-activated protein kinase 185 413 - -
Seca9g05808 559 ProSiteProfiles Protein kinase domain profile. 99 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05808 559 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 443 - -
Seca9g05808 559 Gene3D Transferase(Phosphotransferase) domain 1 185 413 - -
Seca9g05808 559 FunFam Mitogen-activated protein kinase 414 436 - -
Seca9g05808 559 FunFam Mitogen-activated protein kinase 89 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05808 Seca-Chr9 170230294 170236756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05808 1 538 MAP Kinase Gene Family AT1G73670 73.571 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca9g05808 Pkinase 1.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05808 - - gmx:100776784 873.618