Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05802 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGGAAATGAACAAGGGTCTTCTTCATCAGAGGGCAACAAGTCCAATCCTGCTTCATCTTCATCTTCTAAGAGGCATTTGCGCTCTAGGCCCCCTCAAAGTTCTGAGCATAAGCCCTTTTCTGGACTCTCCAATTGGTTGCATTCAGTTGCTAATAGGCAGAGTCCTAGTCCTCCTTCTTTGAACCAGGCAAGAGGAGAGAAAATGGAGCCATCTGACGCAGTGAGTAGCAGTGGTGGTTTGGATGTTGTTTCAGATTCAGCTAGGGGTGATTCAGGGTCTAGTGCTTCCAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAACTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAACAGATCAGTTTAGGCTCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTTGGATGGTTTCTATGATCTGTATGGAATCTTAACGGAGTCAACCTTTGCAACAATGCCTTCCCTTTTAGATCTGCAAGGAAGACCAATCTCTGGCAGTGTCACATGGGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTCGAGCAAAAAGCCCTGGAGTTGACTGTCAAATCAAGACCTGATTCTGCAGTATTTATAGATAGCAATTTGGTGCGCAAGCTTGCCATGTTTGTGGCTGACTATATGGGTGGACCTGTTGGAGATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTGAAAGCAACCCTAGGTAGCATGGTTTTGCCACTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATCTCGGTTGGTGAAAGGACTGCCATATACAGATTCTGATGATGTGGCAATAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGACCCTGGAACTCTTATTCCATCCGATGCAACTGGATCACATATTGAGTATGATGAAACATTTTCTGTGGCCAGTCCTTTATCAAGAGACCTTGATTCGTCTCATGTAGCATCATCTAGCAGTGGGGTTGGAAGTTCTTCTGAAGACACTTCAGATTTTGGGATGCTGGACAGAGGAAACAGATCAAAGCATTCTTCCTATGCAAAGAAAGAATCTGACTTAAGCAGACCCACCACAGGAAAAGAAGAACCAATGAGACCCTTAAATGAATTCAAAAGTCCCCACAATGTTGAGAAAATCACGGGGCAGAAAGCTCCTGGCAGACCTAATCATCCATATGTGCATACAAGATCTTCTTCTTGGAGTGAAGGGGTCAGTTCCCCTGCAGTACGCAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATACTGCCAAGGAGAACCCTCACTTGGCCCAGAAACTTCATAATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAATTTATTTTCTGATATTTATCATGAGGAGTTAGGTTCCCTAACTGAGGCCAACTTACCAACTGAAGCAAAAAATGAACATAAACAGGGAAGTGGACAGCAAAACACTGAGGTTGATGATAATCTTGGTCCTGCTCGATTTTTGCCTCCTTTAACTCACTACAGAGTTCACCATGAAGCAAGTTCTAGCAGTCAGCCAGAGCCTTCTAAGCCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTCATACAAGGGAAGCAGCTGGACAGCATATACCACCTCAGGTAAAATATGGGAAAAATGTCCCGGTTGCTGCAGCAGCTGCCGCCGCCGCTGCCGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCAAAGTCAAGTGCTGACTCAAACATTGAGCTTCCAGTAACTGCGGCTGCTACTGCGGCAGCTGTAGTAGCAACTACTGCTGCTGTCACTAAACAGTATGAGCAGAGCAGTCGAAGTGATGGAGATACGGACAGTGCTGGTTATGAGCTGAAGGGTAGTGGTGATGGAGAGCATATTGCTTTGGGAGCAAATTTAGAAGGCGAAAGAAAATCTGATAGCTCAGTAGTAAGCAATGATAGCAGAAAATCTGATTCTGCTTTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACGCTGGGCGAGCGTATTGGACTTGGATCATATGGGGAGGTGTACCGTGGTGAATGGCGTGGAACTGAGGTTGCTGTAAAGAGGTTTCTAGATCAAGATATATCTGGGGAATCACTTGAAGAATTCAAAACTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTCGACCTCCGAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATTCACCGGCCAAATAATCAATTAGATGAGCGAAGACGTTTGAGAATGGCCCTCGATACTGCTCGAGGAATGAACTATTTGCACAACTGTAGTCCAACAATAGTTCATCGTGATTTGAAGTCTCCGAATCTTCTTGTTGATAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCCTGTCGCGTTTGAAGCATAGCACATTCCTTTCTTCCAGATCGACTGCAGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCGTCAAATGAAAAGTGTGACGTTTATAGCTTCGGGGTCGTATTGTGGGAGCTCTCTACTTTGCAGCAACCATGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTAGGTTTCCAATACCGCCGTCTTGACATTCCAGATAATATGGACCCTGCTGTTGCAGATATTATTAGGAAATGCTGGCAGACAGATTCAAAGTTGAGACCTACATTTGCTGAAATATTGGCTGCTCTAAAGCCATTACAGAAACCAATTATTGGTTCTCAAGTTCACCCGGTAGCATCAAGTAGGAAAGAGAAGGCTCAGCCATCAGTTGAAGAAGACCAAGAAAGATAG 3093 0.4391 MKNILKKLHIMSNQSGNEQGSSSSEGNKSNPASSSSSKRHLRSRPPQSSEHKPFSGLSNWLHSVANRQSPSPPSLNQARGEKMEPSDAVSSSGGLDVVSDSARGDSGSSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESTFATMPSLLDLQGRPISGSVTWEAVLVNRAADSNLLKLEQKALELTVKSRPDSAVFIDSNLVRKLAMFVADYMGGPVGDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPSRLVKGLPYTDSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEYDETFSVASPLSRDLDSSHVASSSSGVGSSSEDTSDFGMLDRGNRSKHSSYAKKESDLSRPTTGKEEPMRPLNEFKSPHNVEKITGQKAPGRPNHPYVHTRSSSWSEGVSSPAVRRMKVKDVSQYMIDTAKENPHLAQKLHNVLLESGVVAPPNLFSDIYHEELGSLTEANLPTEAKNEHKQGSGQQNTEVDDNLGPARFLPPLTHYRVHHEASSSSQPEPSKPVEGLGINLPLHTREAAGQHIPPQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSADSNIELPVTAAATAAAVVATTAAVTKQYEQSSRSDGDTDSAGYELKGSGDGEHIALGANLEGERKSDSSVVSNDSRKSDSALDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCSPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRLKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVVLWELSTLQQPWGGMNPMQVVGAVGFQYRRLDIPDNMDPAVADIIRKCWQTDSKLRPTFAEILAALKPLQKPIIGSQVHPVASSRKEKAQPSVEEDQER. 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05802 1030 MobiDBLite consensus disorder prediction 408 447 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 1 118 - -
Seca9g05802 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 864 876 IPR008271 GO:0004672|GO:0006468
Seca9g05802 1030 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 87 1006 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 386 480 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 92 108 - -
Seca9g05802 1030 SUPERFAMILY Protein kinase-like (PK-like) 729 996 IPR011009 -
Seca9g05802 1030 FunFam Serine/threonine-protein kinase CTR1 824 1007 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 386 407 - -
Seca9g05802 1030 Pfam Protein tyrosine and serine/threonine kinase 745 996 IPR001245 GO:0004672|GO:0006468
Seca9g05802 1030 PRINTS Tyrosine kinase catalytic domain signature 905 915 IPR001245 GO:0004672|GO:0006468
Seca9g05802 1030 PRINTS Tyrosine kinase catalytic domain signature 858 876 IPR001245 GO:0004672|GO:0006468
Seca9g05802 1030 PRINTS Tyrosine kinase catalytic domain signature 968 990 IPR001245 GO:0004672|GO:0006468
Seca9g05802 1030 PRINTS Tyrosine kinase catalytic domain signature 819 832 IPR001245 GO:0004672|GO:0006468
Seca9g05802 1030 PRINTS Tyrosine kinase catalytic domain signature 924 946 IPR001245 GO:0004672|GO:0006468
Seca9g05802 1030 SMART serkin_6 745 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05802 1030 FunFam Serine/threonine-protein kinase isoform 1 736 823 - -
Seca9g05802 1030 ProSitePatterns Protein kinases ATP-binding region signature. 751 772 IPR017441 GO:0005524
Seca9g05802 1030 MobiDBLite consensus disorder prediction 545 563 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 676 700 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 8 76 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 708 727 - -
Seca9g05802 1030 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 1008 1030 - -
Seca9g05802 1030 ProSiteProfiles Protein kinase domain profile. 745 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05802 1030 Gene3D Transferase(Phosphotransferase) domain 1 824 1006 - -
Seca9g05802 1030 Gene3D Phosphorylase Kinase; domain 1 738 822 - -
Seca9g05802 1030 CDD STKc_MAP3K-like 751 997 - -
Seca9g05802 1030 MobiDBLite consensus disorder prediction 545 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05802 Seca-Chr9 170106539 170117449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05802 1 1015 MAP Kinase Kinase Kinase AT1G73660 62.170 0.0 1167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Seca9g05802 PK_Tyr_Ser-Thr 3.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05802 - - gmx:100816332 1560.04