Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05764 ATGGAGCACAATGAATGTCAGGCATTTGAAATTGATGAGCCTAAAGATATTTTTTTGGGTCAAGTTGTGTATAGCAAAGATGAAGCTTATAACTTATACCAAGAACATGCATTCAAAATGGGTTTTAGTGTAAGAAAAGGGAGGGCATTGTACTATGATAGTGAGAAAAAGAATATACGTTTGAAAGACTATTATTGTTCCAAACAGGGGTTTAAGAATAATGAACCTCAAGGTGAAGTGACTTATGAAAGAGCAGATTCAAGAACAAATTGCCAAGCTATGGTGAGATTTAATGTGAGTAAGGAAGGATTATGGAAAATTACAAAGCTGGAATTAAATCACAACCATGACTTTGTGCCACCTGAGCAAAGGCATTTGTTACATTCTATGAGAAATATGTCAAATGTCAAAGGAGACCTCATAAAATCCATGGTGAATGTCGGTATGAGAGTTACTAATATTTGGAGTTATTTAGGAGAAGAGGTTGGTGGATGTGATAACCTCGATATAACAATGAAAGATATGCATAATTATGTTTACTCTGAAAAGATGAAATTAATTGATGTTGGTGATGCCCAGACTTTAGTGAACCACTTACAAAGTAGACAAGCACAGGATGCAATGTTCTACTATAGTGTTCAGTTAGACCAGGAATCACGTTTGGCTAATGTATTTTGGAGAGATGGTAAATCTAAAGTTGATTATGATTGCTTTGGGGATGTTGTGGTTTTTGACACCACTTACCGTACTAACAAATATAACTTGATTTGTGCCCCATTTGTTGGTGTAAATCATCATTGGCAAAATGTCATGTTTGGTTGTGCCTTACTATCTAATGAAACTTCAGCTTCTTTTTCTTGGTTGTTCAAAGTGATTTTGGAAAGCATGGAAAACAAACAACCAAAAACAATTTTTACAGATCAAGATGTTGCAATGGCTAAAGCAATTGGAGAGGTAATGTTAAATACACGCCATCGATTATGCTTATGGCATATAGCTAAAAATGCTCCTTCTCATTTGGGTTCTCTCAATTCTGATTATAAGTTTCAAAGCTTATTCAATAATTGCATGAAAGGTTGTGACTCAGAAGAAGAATTTCAAAGCACTTGGGGTGAGATGATAAACGAGTACAAACTTCATGGTCATCAATGGTTGAGCAATATGTATAAAATTCGTCACAAGCGGAGCACTGCTTTTAGCAAGGATATATTCTCTGCCGGTATCAAGTCCTCTCAAAGGAGTGAAAGTACAAATAGTGTTTTGAATGAGATTGCAGGAAAAACAACAAGTCTCACACAATTCATTTTGGCATTTGAGAAGATGGTAAAAAAGTGGCGGCATTTAGAGGTTGAGAAGGAATTCAAAAATAAGCAAAGTGAGCCTCATCGCATTATAAATATTAGTGAAACTCTGCGACAAGCATCTATGATATATACTCACAAGATCTTTAAATTGTTCTTGAATGAATATCTTGATGGCACGGGTGGAAGCACTTCTATGCAGATTGGTGGGTGTGATAATGTGTCATATCATGAAGTAATTTTGAACAACATGCCTAATAAGAAATATATGGTAACATTTGACTCTTCCACTATTATGATTAATTGTAGCTGCCGCAAATTTGATTCCATGGGTATTCTTTGTAGTCATTCTTTGAGAATTTACAACATTAAAGGTATTCTAAAAATACCTGATCAATACTTCTTAAAAAGATGGTCAAAAGAGGCAAGGTCCATGATTTATGAGCATACAAAAGAAGATTCTAGCTCCAGTAACATTAATTCAATGATCAATGGTGATGATGCTGGTTTTGTTTATCGAAATGCTATTATGAAGTCATTTTATAATCTTGTTTTGGAAACTCAAGAACATAAAGAAGCTCAACAAATTATGTGGAAATTGCTTGATATTGGAGTTGAGCGTGTGCGACAATATGTCGGTAAGCTCAATTTAAATTCAAATTCAGAAACCATTGATATTGAGGACAATGAGTGTGCTGCAATTTTTAATCCCCCTCTTGCAAAGACTAAAGGGATATCTAGTGCTCGGAAGAAGGGGCATTTTGAGAAAAGGAAACGACCAACCACAAAAGCAAAGAAAGGTAGGGATTGGACAGCTTTTTAG 2124 0.3517 MEHNECQAFEIDEPKDIFLGQVVYSKDEAYNLYQEHAFKMGFSVRKGRALYYDSEKKNIRLKDYYCSKQGFKNNEPQGEVTYERADSRTNCQAMVRFNVSKEGLWKITKLELNHNHDFVPPEQRHLLHSMRNMSNVKGDLIKSMVNVGMRVTNIWSYLGEEVGGCDNLDITMKDMHNYVYSEKMKLIDVGDAQTLVNHLQSRQAQDAMFYYSVQLDQESRLANVFWRDGKSKVDYDCFGDVVVFDTTYRTNKYNLICAPFVGVNHHWQNVMFGCALLSNETSASFSWLFKVILESMENKQPKTIFTDQDVAMAKAIGEVMLNTRHRLCLWHIAKNAPSHLGSLNSDYKFQSLFNNCMKGCDSEEEFQSTWGEMINEYKLHGHQWLSNMYKIRHKRSTAFSKDIFSAGIKSSQRSESTNSVLNEIAGKTTSLTQFILAFEKMVKKWRHLEVEKEFKNKQSEPHRIINISETLRQASMIYTHKIFKLFLNEYLDGTGGSTSMQIGGCDNVSYHEVILNNMPNKKYMVTFDSSTIMINCSCRKFDSMGILCSHSLRIYNIKGILKIPDQYFLKRWSKEARSMIYEHTKEDSSSSNINSMINGDDAGFVYRNAIMKSFYNLVLETQEHKEAQQIMWKLLDIGVERVRQYVGKLNLNSNSETIDIEDNECAAIFNPPLAKTKGISSARKKGHFEKRKRPTTKAKKGRDWTAF. 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05764 707 ProSiteProfiles Zinc finger SWIM-type profile. 523 559 IPR007527 GO:0008270
Seca9g05764 707 MobiDBLite consensus disorder prediction 680 707 - -
Seca9g05764 707 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 643 IPR031052 GO:0006355
Seca9g05764 707 MobiDBLite consensus disorder prediction 680 698 - -
Seca9g05764 707 Pfam MULE transposase domain 241 335 IPR018289 -
Seca9g05764 707 Pfam SWIM zinc finger 529 553 IPR007527 GO:0008270
Seca9g05764 707 SMART 26again6 534 561 IPR006564 GO:0008270
Seca9g05764 707 Pfam FAR1 DNA-binding domain 32 119 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05764 Seca-Chr9 169155745 169157868 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05764 MULE 1.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05764 - - tpra:123905334 1083.55