Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05746 ATGGTCTTCAAAGGAAGGTTCTTCTCTTCCAAAAAATCCGATTCTTCTAACAGCCCCGATGCTTCCTCCAATAGCCCTCGATCATTCTCCTCTAACTCTCCATCCAGATCCGACAAGAAAAAGTCCAAATCCGCCGCCAATCAAACCCTAACTGCCGCCGCCGCCGGTGGTGCCGGAGGATTCGGAGCCGCCGTCGCTTGCCGCCAGACGCAAGTTAAGGACGGGACCAAGAAGAAGGATGTTGCCAAGGGCAAAGAAAGTCAAACTCCACCGGAGTCTCGCCCCGCCGCCGGAAAAGACTCCGGTTCGAGTTCAGCGTTGAAGAAGTTGACGGCATCGACGGCGGCGGCGGCGGCGGCAGCGGAGGGTAAGGAATCGCCGTCTTCGTCTTCGGTTTCGCCGATTCTGGCCTCGTCGCTTGGTTTGAACAGGATAAAAACGAGATCGGGGCCGTTGCCACAGGAGAGCTTCTTCGGGTTCAGGGGCGATAAGGGTGCTGCGGCGGCGCTCGGCGCCAGTAACCTCTCGAGGCCCGGTGGTGTGAGTGGTGGCAAGAAGAAGGAGGTGGTGAACCAGAACAGAGTAGGGTTTCACGAGGGTTTCGGCACCGGCACCGGAGGTTGGGTTGATAATGGGAGCAATTCGGATAGCATGTCGACGGGGAGTGGTGCACCGTCTAGGGAACAGAGTCCGATTGTGTTGGCGCGGTCGCGGCTACAGAATGGAGAATCATCCTCCGAAGCAGGGAAGCAGGCATCATCACAGGCTCAGACTGGAGGCTTAAGAAGTGCAGATCTTTGTACTCCAGAGACAGGATATGATTTTGAAAATCCGAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGCGGATATCAAGAGCTTTTCCCATGAGTTAAATTCCAAAGGTGTCCGGCCTTATCCATTTTGGAAGCCTCGAAGGTTAAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCCAAATTTGATAAAGAAAAGGAAGCGGTAAACTCTGAGCTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAATTTTGGCTAGGCGCTGTGCTATGACCTCACCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGATTTGGATGATAGGCGTCAAGAGCTTCCTCCAGGGATGCTAAAGCAGCTTCACACTAAAATGCTTTTCATTCTCACAAGGTGTACTAGATTGTTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTTAATCTCCGTCAATCTAGAGTCTTGCATTCTGCTGAAAAATGTATTCCTCCTGCTGTGGGAAGGGATACTAAAAGTTCTAGTGCTGCAAAGACCTTGAAGGCTTCAACAAAAAAAGCTTACAGCCAAGAGCAGAGTATCTTGGGTTGGAAGAAAGATGTTATGCAACATGAAAATGCATTGCTTCAAGCTGATGATGACACTTCAAAACACTTTGAGTCTCCTTCTGGCAGGGATCGGATGGCCTCTTGGAAGAAATTTCCATCTCCATCAGGAAGAAGCCCAAAAGAAACTGCTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAACCTTCAAAGACGTCAAATAATAAGAGATTCACTTCTGATGTGGATCTCTCTGTTGCTAAGCCAGCTGAGCTTCTTCCTATCAAAGATCCGCTGGACCATGCTTCCAAGCACCAACATAAAGTTTCCTGGGGCTACTGGGGTGATCAACCAAATAATAGTGAGGAGAGTTCAATAATTTGTCGTATATGTGAAGAGGAAGTACCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTCTGAGTGTAAATGAGCGTCTTGTCAGAATTGCAGAAACACTAGAAAAGATGATGGAATCATCTACACAGAAGGATACCCATCAAATAGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGCATGACTGAAGAATCTGATGTTATTTCACCTAAACTTAGTGACTGGTCGCGCAGAGGCTCAGAGGATATGCTAGACTGTTTACCTGAAGCTGATAATTCCGTTTTTATGGATGACCTAAAGGGATTGCCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCTGGAAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTCCCACAGATGAATGAACTTGCTGATATAGCACGGTGTGTGGCAAATGCGCCTCTGGATGATGATCGCACAACGTCGTATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGCATTGAGAAGCTGATAAGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATGTAGAGAGCACTGTAATGGATGATGATGTTCTCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACTACTGGGGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATTCGTAAGAATGCTGTGGAAAGTATATTAGCTGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGATTTTTCTATTCTTTTACATGTCGCGAGAACTTGTATCTTGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGTCTAGATGAGGAAGTTGCTCGTGTATATATGGCTGAAGTGGTGCTTGCATTGGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTAAAGCCTGACAATTTATTGATTGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGGCTGGTCCAGCAGTGAGTGGTACATCCCTACTTGGGGAGGATGAACCTCCTGTATTTACATCTGAGGATCAAAGGGAACGGAGGAAGAAACGTTCTGCTGTGGGCACACCGGATTACTTAGCACCAGAGATACTTTTGGGAACTGGACATGGGTATACTGCTGATTGGTGGTCTGTCGGGGTCATTTTATTTGAGTTGCTTGTCGGTATTCCACCTTTCAATGCTGAACACCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCCGCCGTTCCAGAAGAAATGAGTGCTGAAGCACAAGATCTTATTGATCGATTATTGATAGAAGATCCTAACCAAAGACTAGGAGCCAGAGGGGCATCAGAGGTGAAGCAACATGTTTTCTTCAAGGATATTAACTGGGACACACTTGCTAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAAAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTAGTGATGGCCTTGTATATCCAGCAAGTGATATTGAAGATTCTAGTGATGCTGATAGTTTAAGTGGTAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTAGTTCGTCTGTAAATTACTCTTTTAGTAATTTCTCCTTCAAGAATCTGTCCCAGCTTGCATCAATCAATTATGATCTCACCAAAGGATGGAAAGATGACCCGTCTACAAATTCTAGTGCATAG 3939 0.4527 MVFKGRFFSSKKSDSSNSPDASSNSPRSFSSNSPSRSDKKKSKSAANQTLTAAAAGGAGGFGAAVACRQTQVKDGTKKKDVAKGKESQTPPESRPAAGKDSGSSSALKKLTASTAAAAAAAEGKESPSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGAAAALGASNLSRPGGVSGGKKKEVVNQNRVGFHEGFGTGTGGWVDNGSNSDSMSTGSGAPSREQSPIVLARSRLQNGESSSEAGKQASSQAQTGGLRSADLCTPETGYDFENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSKGVRPYPFWKPRRLNNLEEILVVIRAKFDKEKEAVNSELAIFAADLVGVLEKNADTHPEWQETIEDLLILARRCAMTSPGEFWLQCESIVQDLDDRRQELPPGMLKQLHTKMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKCIPPAVGRDTKSSSAAKTLKASTKKAYSQEQSILGWKKDVMQHENALLQADDDTSKHFESPSGRDRMASWKKFPSPSGRSPKETAQLKDQNYGRVEPSKTSNNKRFTSDVDLSVAKPAELLPIKDPLDHASKHQHKVSWGYWGDQPNNSEESSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESSTQKDTHQIVGSPDVAKVSNSSMTEESDVISPKLSDWSRRGSEDMLDCLPEADNSVFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVESTVMDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYMAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLAGPAVSGTSLLGEDEPPVFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSAEAQDLIDRLLIEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDIEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA. 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05746 1312 MobiDBLite consensus disorder prediction 513 530 - -
Seca9g05746 1312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1020 1032 IPR008271 GO:0004672|GO:0006468
Seca9g05746 1312 ProSiteProfiles Protein kinase domain profile. 901 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05746 1312 MobiDBLite consensus disorder prediction 683 705 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 683 700 - -
Seca9g05746 1312 FunFam probable serine/threonine protein kinase IREH1 899 988 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 744 766 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 1 48 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 197 281 - -
Seca9g05746 1312 Gene3D Phosphorylase Kinase; domain 1 899 1219 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 1062 1090 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 1075 1090 - -
Seca9g05746 1312 PANTHER SERINE/THREONINE-PROTEIN KINASE 589 1285 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 9 33 - -
Seca9g05746 1312 Pfam Protein kinase domain 901 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05746 1312 MobiDBLite consensus disorder prediction 72 87 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 207 264 - -
Seca9g05746 1312 CDD STKc_MAST_like 907 1195 - -
Seca9g05746 1312 SUPERFAMILY Protein kinase-like (PK-like) 898 1229 IPR011009 -
Seca9g05746 1312 SMART serkin_6 901 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05746 1312 MobiDBLite consensus disorder prediction 513 571 - -
Seca9g05746 1312 MobiDBLite consensus disorder prediction 543 571 - -
Seca9g05746 1312 Gene3D Transferase(Phosphotransferase) domain 1 985 1208 - -
Seca9g05746 1312 ProSiteProfiles AGC-kinase C-terminal domain profile. 1191 1295 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca9g05746 1312 MobiDBLite consensus disorder prediction 70 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05746 Seca-Chr9 168551981 168568373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05746 1 1306 AGC Kinase Gene Family AT3G17850 66.339 0.0 1661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Seca9g05746 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05746 - - gmx:100776995 2087.38