Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05739 ATGTTCACTTTCTTTCTTGTCTGCATCATCTTTTGGATAGTAATCTCCTCCTCAAGTGTCAAATTCTACATAACTGATGCCTCCCTCACACAATTCAACCTCACAAGCAACAACACCTTATATTACAACTTCAAGGTCAACATCACAGCAAGAAACCCCAATAACAACATCATAGTGTATTATAGGAGGATCACAGCAATTGCTTGGTACAAAGATAATGACTTTGCTCATGTGAGTTTGACACCCTTTGATCAGGGTCACAAGAACACAACTTTCCTTGGCCCTGTAGTGTTTGAAGGGCAGAGTGTGATCAAACTCAAAGCTCAACAACTTGCTGAGTATAATGAGGAGACACTTGTGGGGATTCACAATGACTTGGCTGTGGATTTGGATGTTAGAATCAGAGCTAAGTTTGGAAGGTACAAGAGCAGTCGTTTCAATCCACCAGTTGTGCAGTGCCGTCGATTGAGAGTTCCTTTGATTTCCAATGGTAAATCAGCACCTCCTTTCAGTGTCACCAGATGCAGCAGTGGTGCTTTCTTTACAGATCGTGATGCAGTAGCAGGAGCAGGATCAGGATCAGGACCAGGAGGAGGAGCAGGAGTGGGAGTTGGAGTGGGAGTAGGAGCAGGAGGCAGAGCCTGA 645 0.4465 MFTFFLVCIIFWIVISSSSVKFYITDASLTQFNLTSNNTLYYNFKVNITARNPNNNIIVYYRRITAIAWYKDNDFAHVSLTPFDQGHKNTTFLGPVVFEGQSVIKLKAQQLAEYNEETLVGIHNDLAVDLDVRIRAKFGRYKSSRFNPPVVQCRRLRVPLISNGKSAPPFSVTRCSSGAFFTDRDAVAGAGSGSGPGGGAGVGVGVGVGAGGRA. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05739 214 Pfam Late embryogenesis abundant protein 47 138 IPR004864 -
Seca9g05739 214 PANTHER OS05G0367900 PROTEIN 2 160 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05739 Seca-Chr9 168392706 168393350 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05739 14 160 SNARE and Associated Proteins AT1G32270 31.973 8.70e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05739 - - gmx:100784278 294.278