Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05727 ATGGCTCTTGTGAATGGACCAATTGAAATGGTCAGGAACATATGTGGAGTGAAAGATTCATGGAGATTGAAAGTGAGGGTTGTCCGACTCTGGAAGAGTTGCTCTAAAAACGATCCTAAGAATGTTTTCTCTTTGGAGATGGTTTTGGTGGATGTTGAGGGTGCAAGGATACAGGCAAGTATCTGTAAACTAATGATCAGGAAATTTGCCAATGTTATTGTTGAGGGAGAGGTATACAAGATGATTTACTTTGCTGTTGTGAAGAACGTAGGTAACTTCTGTGCCACCAAACATGAATTCAAGCTAATTTTCAACAGTAGGACAACTGTCTTTCGTGCTGAAAGCCAACTCATTCCAGAGTTTGGTTTGTCATTGTCATCCTCTGAGGATATAAGGAATACGAAGGGGGAATATGAATATTTGTATGACATGATGGGGTTACTTACTGCAGTATCTGCTGAGATAAATATTATTAAAGATGGGAAAACAACACGATTGATTGTGCTTGAGCTCACTGATGATAAGGGTAAGATAAGGTGTACTCTTTTCGGGGACTATGTAGACAAAGTAAATGAATTCCTATCATTGAGTGGTACACAGTTAACTGTTGTTGTCATTCAATATGCAAGAGTTAACACTTATAAGGGTGATGTTGGTTTGGTCAATGTGTTCAACACCTCACGGATATTGTGGAATCCACAAATAGTTGAAGCAATTGAATTTAGAAAAAGGTTATTGTTTAAATATTTGAGCTTATAA 759 0.3755 MALVNGPIEMVRNICGVKDSWRLKVRVVRLWKSCSKNDPKNVFSLEMVLVDVEGARIQASICKLMIRKFANVIVEGEVYKMIYFAVVKNVGNFCATKHEFKLIFNSRTTVFRAESQLIPEFGLSLSSSEDIRNTKGEYEYLYDMMGLLTAVSAEINIIKDGKTTRLIVLELTDDKGKIRCTLFGDYVDKVNEFLSLSGTQLTVVVIQYARVNTYKGDVGLVNVFNTSRILWNPQIVEAIEFRKRLLFKYLSL. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05727 252 SUPERFAMILY Nucleic acid-binding proteins 13 114 IPR012340 -
Seca9g05727 252 CDD RPA1_DBD_B_like 143 245 - -
Seca9g05727 252 Pfam Domain of unknown function DUF223 46 114 IPR003871 -
Seca9g05727 252 Gene3D - 118 248 IPR012340 -
Seca9g05727 252 SUPERFAMILY Nucleic acid-binding proteins 129 245 IPR012340 -
Seca9g05727 252 Gene3D - 7 114 IPR012340 -
Seca9g05727 252 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05727 Seca-Chr9 168125126 168126290 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05727 21 242 Core DNA Replication Machinery Family AT2G06510 27.500 1.98e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05727 - - lja:Lj0g3v0341019.1 242.662