Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05714 ATGCTTGAGTTGGCTGCAGTTGGTGCTGAGTTTAAGGACGAATCTTTTCGATCAAAGGAGGCATTCGAATCAGATGAATTTAGAACAACAGGCATGTGGATGATGACACTTCCAATTCCAAAGGAAGGGCTCTTGTATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATAGTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTACGCCCAATATGCAAGGTATCTGGACCAGTATTTATTTTCTAG 309 0.3948 MLELAAVGAEFKDESFRSKEAFESDEFRTTGMWMMTLPIPKEGLLYLDRRKRLIIAMDAAFGMEYLHSKNSVHFDLKCDNLLVNLKDPLRPICKVSGPVFIF. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05714 102 PANTHER SERINE-THREONINE PROTEIN KINASE 47 96 - -
Seca9g05714 102 SUPERFAMILY Protein kinase-like (PK-like) 41 85 IPR011009 -
Seca9g05714 102 Gene3D Transferase(Phosphotransferase) domain 1 34 97 - -
Seca9g05714 102 Pfam Protein tyrosine and serine/threonine kinase 49 86 IPR001245 GO:0004672|GO:0006468
Seca9g05714 102 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05714 Seca-Chr9 167831075 167832912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05714 46 95 MAP Kinase Kinase Kinase AT1G79570 94.000 6.16e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Seca9g05714 PK_Tyr_Ser-Thr 7.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05714 - - var:108333936 103.99