Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05666 ATGCCCCAGAATCAGATTCCTGATCTTTCTCTGCACATTAGTCTCCCAAATAGTGCTCCTTCTTCAATTTGCACTGAAGAAGAAGGGGATTCACCTTTTCATATATGGAGAGCAGATGGTGAAGTAGGTCTCAAATCCCATAGTGATGGTTCAATCAAAGGCAATAATCCTCAAGTAGATACAGAACTTTCCTTAGCTAACCCCACAAATACTCCCTCTGAGGCTGAGAGTCCTTGGAGGAGGCAACAAACAAATATTCTTCATGTCTCAGAGGGTGTAAGTGAAAGAGTAAGACCCTTCAATGGAATCCCTCTTTACAATACCAATAAAAACAACAACTTTTCCACTTTGGAAAACAATTCCTCAATAGAAAGGGACTCCAAGCAGTTTTCTCTGTATGCAATTCCTTATAACCCTTCTTGTTCTGCTAATGGTGTAAGACCAATCTCAAGGTTTAATGGGATAACCATGGAGACTCTAAGACCCCAACAGTTTCAATATTTGGATAATCTTCACCATCTTCATCATCAGCAGCAGCAACAACAACAGTTTGGGATGAATGGAGGTTCTGATTTTGTAAATGGATTTGTAAGGTCAAGAATGATGGGAAGGCAACAAAGTAAGAGAAACATGAGGGCACCAAGAATGCGTTGGACTAGTTCTCTTCACAATCGCTTTGTTCATGCTGTTGAACTACTTGGAGGCCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAACTCATGGATGTGAAAGATCTAACACTAGCTCATGTCAAGAGCCATTTACAGATGTATCGGACTGTTAAGAACACTGACAAGCCAGCAGCTTCTTCAGATGGAGATGAGGATTTCATGGCCCTAACACCACCCCTTAATCAAAATAAGAACTATTTAACCAACCAAAATGCAACTCTAAATCATGATATGGGTTACACTTCCAGCAATCTATGGGCTAATTCTTCTTCCAGCTTTATCTCAGATGAAAAATTTTCTCGGTTGTCACAATATTTGTACTGCAAAAGGGCTCCTTCAAGTCAGAAAGACAGGTAG 1050 0.4048 MPQNQIPDLSLHISLPNSAPSSICTEEEGDSPFHIWRADGEVGLKSHSDGSIKGNNPQVDTELSLANPTNTPSEAESPWRRQQTNILHVSEGVSERVRPFNGIPLYNTNKNNNFSTLENNSSIERDSKQFSLYAIPYNPSCSANGVRPISRFNGITMETLRPQQFQYLDNLHHLHHQQQQQQQFGMNGGSDFVNGFVRSRMMGRQQSKRNMRAPRMRWTSSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMALTPPLNQNKNYLTNQNATLNHDMGYTSSNLWANSSSSFISDEKFSRLSQYLYCKRAPSSQKDR. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05666 349 MobiDBLite consensus disorder prediction 49 80 - -
Seca9g05666 349 Gene3D - 213 270 - -
Seca9g05666 349 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 7 323 IPR044847 GO:0000976|GO:0006355|GO:0010158
Seca9g05666 349 MobiDBLite consensus disorder prediction 45 80 - -
Seca9g05666 349 SUPERFAMILY Homeodomain-like 211 268 IPR009057 -
Seca9g05666 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 267 IPR006447 GO:0003677
Seca9g05666 349 Pfam Myb-like DNA-binding domain 215 266 IPR001005 -
Seca9g05666 349 FunFam Myb family transcription factor 212 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05666 Seca-Chr9 166384338 166388370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05666 6 304 G2-like Transcription Factor Family AT5G16560 37.994 2.35e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca9g05666 Myb_DNA-binding 9.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05666 - - lang:109340070 370.163