Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05650 ATGGATGGTGACAATGGTCTTAACATACGAAATTGGGGTTACTATGAACCCGCTACCTCTTTTAAGAGCCATCTGGGGCTGCAGCTGATGTCTTCCATGCCAGAAAAACCTCTGCTTGGAGGGCGCAATGCCGCAGTTTTGTCTGGTACTAATGGGGCATTTCACCATAGGGACATTGGGATGCCCCAAGCTACATACCCTATGGATTATATGAGGGATGCATGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCTAATTATGGTGCTATTCCGGAGACATCTTCAGCACATCATATTCAAATGATTCAACAACCTGAATTGCCAAAGGAAGAAAGGCCAATGGAAGAGGCACCTGTTGTTGAGAAGCCAAACAACACTGGTAAGAAAAGGCAGGGGCCAAAGGTGCCCAAATCCCCCAAGGCAAAGAAGCCTAAGAGGGGCCCTCGCGTGCCAAAGGATGAGAATACTCCTTCAGTTCAACGAGCAAGGGTTCCGAAGAAAGCTACTGAAATTGTTATAAATGGGATTGATCTGGATATTTCCAGTATTCCAATTCCTGTTTGTTCCTGCACTGGGACACCTCAACAGTGTTATAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGCTGCACAACAGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGGCGCGGTGCTAGGATAGCTGGGAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTACTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 849 0.4535 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGTNGAFHHRDIGMPQATYPMDYMRDAWISSQREKYMNMIPTNPNYGAIPETSSAHHIQMIQQPELPKEERPMEEAPVVEKPNNTGKKRQGPKVPKSPKAKKPKRGPRVPKDENTPSVQRARVPKKATEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFTNPIDLRTYWAKHGTNKFVTIR. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05650 282 PANTHER - 1 282 IPR010409 -
Seca9g05650 282 SMART GAGA_bind_2 1 282 IPR010409 -
Seca9g05650 282 MobiDBLite consensus disorder prediction 113 171 - -
Seca9g05650 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05650 Seca-Chr9 166054715 166056830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05650 1 282 BBR or BPC Transcription factor family AT2G01930 53.177 1.50e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Seca9g05650 GAGA_bind 3.1e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05650 - - gmx:606296 513.457