Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05622 ATGAATGTAGCTTCAATTCCAATTGCTGAAGGTGTAGAGAAATGGGTCGATAATATTCATAGCAATGTTGTGCAACATGGCCAAGAGCGTGTTACTGACTATATACCACACTTGGCAATGGAGTTTGAATCCGAGGTAGCTGCCTATGAATTTTACAATGAGTACAGTAAGAGGGTTGGGTTTGGCATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATGTTGACTTCAAGAAGATTCTCATGCTTCAAAGAGGGCAAACGATGTGTAGACAAACGAGACCACTTGACGAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCCCGTATGGTTATTTCACTTGATCGGAAGATAGGGAAATACAAGGTTATTGACTTTATAGCTCAACATAATCACCCTCGTCAATCGACAAAATATGCTTATATGATTCGTTCTCATCGAAAAATTTCTGAGTCACAAGCATCACACATTGTATTGGCAGATGCATCTGGATTGAAACCAAAAGATTTTCATGAATATGTGTCCAAGCAATCTGGTGGAATAGACAGTGTTGGTTACACAAGACAAGACCACAAGAATTACCTTCGAACTAAAAGGAATCAATGTTTAAGGTATGGTGAAGTGGGTGCATTGTTGACGTACTTCAAACAACAAAGTGAAAATCCTTCATTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAATATATTTTGGGCAGATGCAGAAATGATAAATGATTATGGGTACTTTGGTGATGTCATCACTTTTGACACCACATACAAGACAAATAAGGATTATCGACCCCTAGGAGTATTTGTTGGGCTTAATAATCACAAGCAGACAGTTGTTTTTGGGGAAACATTGCTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACTTTCCTCAAAGCAATGGGTGGAGAAAAGCCTAAAACCATTCTAACCGATCAAGATGCAGCAATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTATGCACTTGGCATATAAGACAAAATGCCCTAAGACATGTGAACCACCTTTATCAAATGAATTCACAATTTTGCTCAGATGTTGAAGCATGCATTGATCTACATGAGGAGGAATGTGAATTTCTGAAGGCATGGAATGAACTACTTGTTGATCATAATGTTTCCGATGATTCATGGCTACATGGGATTTTTCGAGTGAAAGAAAAGTGGGCATGGGCTTATGTTCGAAAAACTTTTACTGCGGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATACTGATTTGAAAAACCATTTGAAGTCCGATTTAAATTTGGTACAATTTTTCACACACTTTGAAAGAGTTGTAAATGGAAAGCTAAACAATGAGTCAGAAGCCGAATATGAGTCAATACATAAGCTTCCTAGATTGAAAATGAAGAAGGCCCCTATGCTTGTGCAAGCTGGAAACATTTACACTCCAAAAGTTTTTGAGGAGTTCCAAGAGGAATATGAGGAATTTCAAGGCACTTGCATAAAGGAATTGAAAGAAGGGTTGTATATTGTTACAAATTATGATAACAGTAAGGAGCGAAAAGTAGTGGGGATTGTGGGGGATGAAAAGGTTGCATGTGATTGCCGTAAATTTGAGACTCATGGTATCTTATGCAGTCATGCTTTGAAAGTTTTAGACTCATGGTATCTTATTGCTTACTTTCATTTTTCAACAATTTATCAATTTCCTTATTATACATGTTACTTACACAATAAACTATACAGGAACAATCTGTAG 1809 0.3682 MNVASIPIAEGVEKWVDNIHSNVVQHGQERVTDYIPHLAMEFESEVAAYEFYNEYSKRVGFGIRREYGNKSKKDGMLTSRRFSCFKEGKRCVDKRDHLTKEPRAETRTGCEARMVISLDRKIGKYKVIDFIAQHNHPRQSTKYAYMIRSHRKISESQASHIVLADASGLKPKDFHEYVSKQSGGIDSVGYTRQDHKNYLRTKRNQCLRYGEVGALLTYFKQQSENPSFFYDFQMDVEEQITNIFWADAEMINDYGYFGDVITFDTTYKTNKDYRPLGVFVGLNNHKQTVVFGETLLYDETIPSFQWLFETFLKAMGGEKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRQNALRHVNHLYQMNSQFCSDVEACIDLHEEECEFLKAWNELLVDHNVSDDSWLHGIFRVKEKWAWAYVRKTFTAGMRSTQLSESFNTDLKNHLKSDLNLVQFFTHFERVVNGKLNNESEAEYESIHKLPRLKMKKAPMLVQAGNIYTPKVFEEFQEEYEEFQGTCIKELKEGLYIVTNYDNSKERKVVGIVGDEKVACDCRKFETHGILCSHALKVLDSWYLIAYFHFSTIYQFPYYTCYLHNKLYRNNL. 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05622 602 Pfam FAR1 DNA-binding domain 50 137 IPR004330 -
Seca9g05622 602 Pfam SWIM zinc finger 526 572 IPR007527 GO:0008270
Seca9g05622 602 ProSiteProfiles WRKY domain profile. 65 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca9g05622 602 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 575 IPR031052 GO:0006355
Seca9g05622 602 ProSiteProfiles Zinc finger SWIM-type profile. 526 573 IPR007527 GO:0008270
Seca9g05622 602 SMART 26again6 548 575 IPR006564 GO:0008270
Seca9g05622 602 Pfam MULE transposase domain 260 354 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05622 Seca-Chr9 165270102 165272006 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05622 MULE 5.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05622 - - psat:127085847 909.442