Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05597 ATGGATGAGCCTATTTTAGACGCCATTTGTGAGAGACTGAGACAAAAGACATACATCAATGGAAGTAGAATTTTGAGTCAAGGTGGTCTAGTAGAGAAGATGGTCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGGATTTCAGTTCCCTTATCTGAAGGAGATGCTTGTGATGGTAAAAAAGTAAGGCTTCAGGGACAAAGATTACTTAGCAACAGGACAGTAAAGTGCTTAACAAATGTGGAAGCTTTTTCACTCCGAGCTGCAGATCTTGAAGAAGTCACAACCCTTTTCATGAGATCCTTGAGGAGTCTACGTGTTCAAGGACCCCTAAGGTAA 348 0.4138 MDEPILDAICERLRQKTYINGSRILSQGGLVEKMVFIVRGKLESIGEDGISVPLSEGDACDGKKVRLQGQRLLSNRTVKCLTNVEAFSLRAADLEEVTTLFMRSLRSLRVQGPLR. 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05597 115 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 107 - -
Seca9g05597 115 Gene3D Jelly Rolls 1 103 IPR014710 -
Seca9g05597 115 SUPERFAMILY cAMP-binding domain-like 1 101 IPR018490 -
Seca9g05597 115 CDD CAP_ED 1 97 IPR000595 -
Seca9g05597 115 ProSiteProfiles cAMP/cGMP binding motif profile. 1 58 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05597 Seca-Chr9 164563578 164564328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05597 1 60 Ion Channels AT3G17700 73.333 3.40e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05597 K05391 - lja:Lj1g3v2646140.1 202.601