Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05568 ATGTTCTACCTTTGCCTCATTGGCTCCATTAACTTGAACTATGTAAAGGGAGAAATCTACATTGTTGGTGACGGCTATGGTTGGGATGACTTCTTTGATTTCAGCAACTGGTCTGATGGAAAAGAATTTCATGTTGGTGATGTCTTGGTGTTCAATTATGAGAGTGGCTTACATAATGTACTGCAAGTTGATTGTACAGCTTATGAGAACTGCATAAAGGAGTCATATATACAGCAGTTGGGTAGTACCGTAGTGGCAATGACTCGGTGGTTTTGCAGGAGGAAGGCATAG 291 0.4124 MFYLCLIGSINLNYVKGEIYIVGDGYGWDDFFDFSNWSDGKEFHVGDVLVFNYESGLHNVLQVDCTAYENCIKESYIQQLGSTVVAMTRWFCRRKA. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05568 96 Gene3D - 16 94 IPR008972 -
Seca9g05568 96 ProSiteProfiles Phytocyanin domain profile. 18 96 IPR003245 GO:0009055
Seca9g05568 96 Pfam Plastocyanin-like domain 31 80 IPR003245 GO:0009055
Seca9g05568 96 SUPERFAMILY Cupredoxins 18 85 IPR008972 -
Seca9g05568 96 PANTHER BLUE COPPER PROTEIN 19 85 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05568 Seca-Chr9 163895560 163897058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05568 4 78 Phytocyanin Superfamily AT5G15350 32.000 7.29e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05568 - - ccaj:109803369 115.546