Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05565 ATGGTTGTCTCTTGTCTTTTTATCTTTTTTTTTTTGCTGCACGCACCTATTTCAGCTAGCCTTGTTTTCAACTTCTATGAAACTTCATGCCCAACAGCAAAGCTCATTGTAAGGAACACTGTCAGCTCATCCTCTGCCTCTGATCCTTCAATTCCTGGAAAGCTGCTTCGCTTGGTTTTTCATGATTGCTTTGTGGAGGTTAGTGTTAGTTCTACTCCTACGCTCATTTTAATACACCCCATTACATTAAAACAAAAAAGGGGAAAAAACATCTTGAGTTTATGTCTTGAGTTATATAAACCAATTTAA 309 0.3722 MVVSCLFIFFFLLHAPISASLVFNFYETSCPTAKLIVRNTVSSSSASDPSIPGKLLRLVFHDCFVEVSVSSTPTLILIHPITLKQKRGKNILSLCLELYKPI. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05565 102 Gene3D - 21 92 - -
Seca9g05565 102 SUPERFAMILY Heme-dependent peroxidases 19 65 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g05565 102 PANTHER PEROXIDASE 25-RELATED 11 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05565 102 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05565 102 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05565 102 ProSiteProfiles Plant heme peroxidase family profile. 20 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05565 Seca-Chr9 163863557 163863865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05565 19 66 Peroxidase AT2G24800 72.917 7.91e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05565 K00430 K18328 gmx:100803223 100.523